| Chain sequence(s) |
A: SNAQVQLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVAAISKGGYKYDAVSLEGRFTISRDNSKNTVYLQMNSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSSAEAAAKEAAAKEAAAKAGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.9650 | |
| 2 | N | A | -1.8389 | |
| 3 | A | A | -1.5666 | |
| 4 | Q | A | -1.8066 | |
| 5 | V | A | -1.2436 | |
| 6 | Q | A | -0.7520 | |
| 7 | L | A | 0.0000 | |
| 8 | V | A | 1.1538 | |
| 9 | E | A | 0.3563 | |
| 10 | S | A | -0.1326 | |
| 11 | G | A | -0.7265 | |
| 12 | G | A | 0.0855 | |
| 13 | G | A | 0.5942 | |
| 14 | L | A | 1.3957 | |
| 15 | V | A | 0.2497 | |
| 16 | Q | A | -0.5299 | |
| 17 | P | A | -1.3374 | |
| 18 | G | A | -1.2924 | |
| 19 | G | A | -0.7361 | |
| 20 | S | A | -1.1644 | |
| 21 | L | A | -0.9424 | |
| 22 | R | A | -2.1372 | |
| 23 | L | A | 0.0000 | |
| 24 | S | A | -0.4118 | |
| 25 | C | A | 0.0000 | |
| 26 | A | A | -0.1546 | |
| 27 | A | A | -0.5713 | |
| 28 | S | A | -0.9328 | |
| 29 | G | A | -1.6469 | |
| 30 | R | A | -2.2295 | |
| 31 | T | A | -1.2264 | |
| 32 | F | A | 0.0000 | |
| 33 | S | A | -1.3582 | |
| 34 | S | A | -1.2736 | |
| 35 | Y | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | M | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | R | A | -1.1487 | |
| 42 | Q | A | -1.9110 | |
| 43 | A | A | -1.7209 | |
| 44 | P | A | -1.3848 | |
| 45 | G | A | -1.9432 | |
| 46 | K | A | -3.4003 | |
| 47 | E | A | -3.6494 | |
| 48 | R | A | -2.9223 | |
| 49 | E | A | -2.5346 | |
| 50 | F | A | 0.0000 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | K | A | -1.5450 | |
| 57 | G | A | -0.7605 | |
| 58 | G | A | -0.5411 | |
| 59 | Y | A | 0.1790 | |
| 60 | K | A | -1.1412 | |
| 61 | Y | A | -0.9984 | |
| 62 | D | A | -1.5366 | |
| 63 | A | A | -0.5567 | |
| 64 | V | A | 0.7845 | |
| 65 | S | A | -0.1199 | |
| 66 | L | A | 0.0000 | |
| 67 | E | A | -1.8179 | |
| 68 | G | A | -1.5275 | |
| 69 | R | A | -1.5799 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -1.2606 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.5833 | |
| 74 | R | A | -1.2960 | |
| 75 | D | A | -1.8650 | |
| 76 | N | A | -2.2889 | |
| 77 | S | A | -1.8522 | |
| 78 | K | A | -2.5360 | |
| 79 | N | A | -2.2009 | |
| 80 | T | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | Y | A | -0.6516 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.3040 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.5639 | |
| 87 | S | A | -1.3102 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.6777 | |
| 90 | P | A | -1.9593 | |
| 91 | E | A | -2.4544 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.5363 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.6829 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.0161 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | S | A | 0.0000 | |
| 101 | S | A | 0.0000 | |
| 102 | R | A | -2.0038 | |
| 103 | A | A | -1.1375 | |
| 104 | Y | A | 0.0694 | |
| 105 | G | A | -0.4485 | |
| 106 | S | A | -0.9571 | |
| 107 | S | A | -1.3916 | |
| 108 | R | A | -2.3010 | |
| 109 | L | A | 0.0000 | |
| 110 | R | A | -2.5130 | |
| 111 | L | A | -1.1478 | |
| 112 | A | A | -1.5591 | |
| 113 | D | A | -2.2437 | |
| 114 | T | A | -1.8438 | |
| 115 | Y | A | 0.0000 | |
| 116 | E | A | -2.1445 | |
| 117 | Y | A | -0.7736 | |
| 118 | W | A | -0.0724 | |
| 119 | G | A | -0.0518 | |
| 120 | Q | A | -0.8592 | |
| 121 | G | A | 0.0616 | |
| 122 | T | A | 0.6122 | |
| 123 | L | A | 1.7116 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | 0.4034 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -0.4904 | |
| 128 | S | A | -0.5562 | |
| 129 | A | A | -0.5596 | |
| 130 | E | A | -0.7159 | |
| 131 | A | A | -1.2089 | |
| 132 | A | A | -1.1519 | |
| 133 | A | A | -1.5073 | |
| 134 | K | A | -2.9484 | |
| 135 | E | A | -3.2451 | |
| 136 | A | A | -2.3432 | |
| 137 | A | A | -2.1867 | |
| 138 | A | A | -2.5060 | |
| 139 | K | A | -3.3989 | |
| 140 | E | A | -3.3757 | |
| 141 | A | A | -2.0774 | |
| 142 | A | A | -1.5645 | |
| 143 | A | A | -1.7553 | |
| 144 | K | A | -2.2151 | |
| 145 | A | A | -0.9544 | |
| 146 | G | A | -0.5906 | |
| 147 | C | A | 0.0135 |