| Chain sequence(s) |
A: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKREEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYEDPPQEEYQEYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:46)
[INFO] Main: Simulation completed successfully. (00:04:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2265 | |
| 2 | D | A | 0.0213 | |
| 3 | V | A | 1.8206 | |
| 4 | F | A | 2.5457 | |
| 5 | M | A | 1.3246 | |
| 6 | K | A | -0.2552 | |
| 7 | G | A | 0.3912 | |
| 8 | L | A | 0.3628 | |
| 9 | S | A | -0.2220 | |
| 10 | M | A | 0.1723 | |
| 11 | A | A | -0.2845 | |
| 12 | K | A | -1.3416 | |
| 13 | E | A | -1.2298 | |
| 14 | G | A | -0.2387 | |
| 15 | V | A | 0.9834 | |
| 16 | V | A | 0.7432 | |
| 17 | A | A | -0.7237 | |
| 18 | A | A | -0.8462 | |
| 19 | A | A | -1.1697 | |
| 20 | E | A | -2.8881 | |
| 21 | K | A | -2.9324 | |
| 22 | T | A | -2.2524 | |
| 23 | K | A | -3.1974 | |
| 24 | Q | A | -3.0485 | |
| 25 | G | A | -1.9382 | |
| 26 | V | A | -0.2376 | |
| 27 | T | A | -1.4842 | |
| 28 | E | A | -2.7361 | |
| 29 | A | A | -1.7899 | |
| 30 | A | A | -2.1391 | |
| 31 | E | A | -3.6741 | |
| 32 | K | A | -3.6725 | |
| 33 | T | A | -2.1692 | |
| 34 | K | A | -2.3972 | |
| 35 | E | A | -2.0115 | |
| 36 | G | A | -0.0324 | |
| 37 | V | A | 1.7006 | |
| 38 | L | A | 1.9515 | |
| 39 | Y | A | 1.9309 | |
| 40 | V | A | 1.8763 | |
| 41 | G | A | 0.6554 | |
| 42 | S | A | -0.2641 | |
| 43 | K | A | -1.2261 | |
| 44 | T | A | -1.0154 | |
| 45 | R | A | -2.1339 | |
| 46 | E | A | -2.4093 | |
| 47 | G | A | -1.2160 | |
| 48 | V | A | 1.1646 | |
| 49 | V | A | 1.2876 | |
| 50 | Q | A | -0.0271 | |
| 51 | G | A | 0.9702 | |
| 52 | V | A | 2.4368 | |
| 53 | A | A | 1.0591 | |
| 54 | S | A | 0.4615 | |
| 55 | V | A | 1.0669 | |
| 56 | A | A | -0.6993 | |
| 57 | E | A | -2.4881 | |
| 58 | K | A | -2.3723 | |
| 59 | T | A | -2.0092 | |
| 60 | K | A | -3.4774 | |
| 61 | E | A | -3.5221 | |
| 62 | Q | A | -2.4581 | |
| 63 | A | A | -1.3531 | |
| 64 | S | A | -1.6290 | |
| 65 | H | A | -1.6824 | |
| 66 | L | A | 0.0412 | |
| 67 | G | A | 0.1797 | |
| 68 | G | A | 0.3231 | |
| 69 | A | A | 1.1055 | |
| 70 | V | A | 2.4149 | |
| 71 | F | A | 2.1830 | |
| 72 | S | A | 0.7853 | |
| 73 | G | A | 0.5772 | |
| 74 | A | A | 0.8097 | |
| 75 | G | A | 0.1379 | |
| 76 | N | A | -0.3961 | |
| 77 | I | A | 1.1443 | |
| 78 | A | A | 1.0107 | |
| 79 | A | A | 0.5755 | |
| 80 | A | A | 0.4444 | |
| 81 | T | A | 0.8503 | |
| 82 | G | A | 0.7381 | |
| 83 | L | A | 1.4006 | |
| 84 | V | A | 0.6906 | |
| 85 | K | A | -2.1485 | |
| 86 | R | A | -2.9685 | |
| 87 | E | A | -3.3019 | |
| 88 | E | A | -2.7535 | |
| 89 | F | A | -0.1065 | |
| 90 | P | A | -0.6404 | |
| 91 | T | A | -0.5790 | |
| 92 | D | A | -1.4433 | |
| 93 | L | A | -0.5660 | |
| 94 | K | A | -2.3270 | |
| 95 | P | A | -1.8140 | |
| 96 | E | A | -2.8037 | |
| 97 | E | A | -2.7286 | |
| 98 | V | A | -0.7560 | |
| 99 | A | A | -1.2730 | |
| 100 | Q | A | -2.6231 | |
| 101 | E | A | -2.9159 | |
| 102 | A | A | -1.8628 | |
| 103 | A | A | -2.2013 | |
| 104 | E | A | -3.3038 | |
| 105 | E | A | -2.3940 | |
| 106 | P | A | -0.5981 | |
| 107 | L | A | 1.0839 | |
| 108 | I | A | 1.6900 | |
| 109 | E | A | 0.0657 | |
| 110 | P | A | 0.2986 | |
| 111 | L | A | 1.2548 | |
| 112 | M | A | 0.2877 | |
| 113 | E | A | -1.6611 | |
| 114 | P | A | -2.0051 | |
| 115 | E | A | -3.0785 | |
| 116 | G | A | -2.4411 | |
| 117 | E | A | -2.6379 | |
| 118 | S | A | -1.5976 | |
| 119 | Y | A | -0.6305 | |
| 120 | E | A | -2.4345 | |
| 121 | D | A | -2.7705 | |
| 122 | P | A | -2.1871 | |
| 123 | P | A | -2.5415 | |
| 124 | Q | A | -2.9138 | |
| 125 | E | A | -3.1810 | |
| 126 | E | A | -3.1417 | |
| 127 | Y | A | -1.1867 | |
| 128 | Q | A | -2.1999 | |
| 129 | E | A | -2.2712 | |
| 130 | Y | A | -0.9225 | |
| 131 | E | A | -2.4892 | |
| 132 | P | A | -1.8754 | |
| 133 | E | A | -2.2343 | |
| 134 | A | A | -1.1501 |