Project name: query_structure

Status: done

Started: 2026-03-17 01:14:03
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPMALTAYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAYQRALPSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-3.508
Maximal score value
1.7601
Average score
-0.5649
Total score value
-50.8425

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7601
2 S A 0.2211
3 D A -0.3813
4 V A -1.1047
5 P A 0.0000
6 R A -3.4088
7 D A -3.5080
8 L A 0.0000
9 E A -2.1856
10 V A 0.0741
11 V A 1.5208
12 A A 0.8754
13 A A 0.2873
14 T A -0.5464
15 P A -1.1455
16 T A -1.0149
17 S A -0.5538
18 L A 0.0000
19 L A 0.6998
20 I A 0.0000
21 S A -1.1742
22 W A 0.0000
23 D A -3.2320
24 A A -1.3905
25 P A 0.0427
26 M A 1.3556
27 A A 1.3051
28 L A 1.4239
29 T A 0.5120
30 A A 0.2344
31 Y A 0.0206
32 Y A 0.0000
33 R A -0.4259
34 I A 0.0000
35 T A 0.0000
36 Y A -0.1739
37 G A 0.0000
38 E A -1.6100
39 T A -1.3517
40 G A -1.2864
41 G A -1.3962
42 N A -1.5247
43 S A -0.8078
44 P A -0.2348
45 V A 0.5939
46 Q A -0.5455
47 E A -1.1319
48 F A -0.4038
49 T A -0.1247
50 V A 0.0000
51 P A -0.6529
52 G A -0.3292
53 S A -0.8481
54 K A -2.0361
55 S A -1.4092
56 T A -0.7893
57 A A 0.0000
58 T A 0.2243
59 I A 0.0000
60 S A -0.6671
61 G A -1.0342
62 L A 0.0000
63 K A -2.4172
64 P A -1.7121
65 G A -1.5241
66 V A -1.6035
67 D A -2.4418
68 Y A 0.0000
69 T A -0.8181
70 I A 0.0000
71 T A -0.1038
72 V A 0.0000
73 Y A -0.2424
74 A A 0.0000
75 Y A 0.0614
76 Q A -0.0512
77 R A -1.1482
78 A A -0.0802
79 L A 0.7747
80 P A -0.1057
81 S A 0.0000
82 K A -1.5816
83 P A -0.9988
84 I A -0.5886
85 S A -0.4901
86 I A -0.7176
87 N A -1.8039
88 Y A -1.5699
89 R A -2.6784
90 T A -1.7234
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Laboratory of Theory of Biopolymers 2018