Project name: 119fc9942ee49b3

Status: done

Started: 2026-05-24 11:11:22
Settings
Chain sequence(s) A: MDPNCSCASDGSCSCAGACKCKQCKCTSCKKSCCSCCPVGCAKCSQGCICKEASDKCSCCA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-3.1091
Maximal score value
0.8294
Average score
-1.0246
Total score value
-62.5033

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1664
2 D A -1.0763
3 P A -1.1661
4 N A -2.3444
5 C A 0.0000
6 S A -0.9349
7 C A -0.6078
8 A A -0.7088
9 S A -1.3418
10 D A -2.1128
11 G A -1.6713
12 S A -0.9718
13 C A -0.6404
14 S A -0.1793
15 C A -0.2949
16 A A -0.4937
17 G A -1.0870
18 A A -0.6279
19 C A -1.0456
20 K A -2.3716
21 C A 0.0000
22 K A -3.1091
23 Q A -2.9589
24 C A -2.5104
25 K A -2.4211
26 C A -1.4905
27 T A -0.8286
28 S A -0.8422
29 C A -1.3944
30 K A -1.8630
31 K A -1.6209
32 S A -0.1487
33 C A 0.2471
34 C A -0.4326
35 S A -1.1411
36 C A -1.3843
37 C A 0.0000
38 P A 0.3791
39 V A 0.8294
40 G A -0.1709
41 C A -0.0820
42 A A -0.8798
43 K A -1.5966
44 C A 0.0000
45 S A -0.8441
46 Q A -1.4946
47 G A -0.5437
48 C A 0.2194
49 I A 0.7988
50 C A -0.5594
51 K A -2.2750
52 E A -2.7096
53 A A -2.0608
54 S A -2.2565
55 D A -2.8842
56 K A -2.8722
57 C A -1.3529
58 S A -0.4846
59 C A -0.0670
60 C A -0.1072
61 A A -0.0802
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018