| Chain sequence(s) |
A: MDPNCSCASDGSCSCAGACKCKQCKCTSCKKSCCSCCPVGCAKCSQGCICKEASDKCSCCA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1664 | |
| 2 | D | A | -1.0763 | |
| 3 | P | A | -1.1661 | |
| 4 | N | A | -2.3444 | |
| 5 | C | A | 0.0000 | |
| 6 | S | A | -0.9349 | |
| 7 | C | A | -0.6078 | |
| 8 | A | A | -0.7088 | |
| 9 | S | A | -1.3418 | |
| 10 | D | A | -2.1128 | |
| 11 | G | A | -1.6713 | |
| 12 | S | A | -0.9718 | |
| 13 | C | A | -0.6404 | |
| 14 | S | A | -0.1793 | |
| 15 | C | A | -0.2949 | |
| 16 | A | A | -0.4937 | |
| 17 | G | A | -1.0870 | |
| 18 | A | A | -0.6279 | |
| 19 | C | A | -1.0456 | |
| 20 | K | A | -2.3716 | |
| 21 | C | A | 0.0000 | |
| 22 | K | A | -3.1091 | |
| 23 | Q | A | -2.9589 | |
| 24 | C | A | -2.5104 | |
| 25 | K | A | -2.4211 | |
| 26 | C | A | -1.4905 | |
| 27 | T | A | -0.8286 | |
| 28 | S | A | -0.8422 | |
| 29 | C | A | -1.3944 | |
| 30 | K | A | -1.8630 | |
| 31 | K | A | -1.6209 | |
| 32 | S | A | -0.1487 | |
| 33 | C | A | 0.2471 | |
| 34 | C | A | -0.4326 | |
| 35 | S | A | -1.1411 | |
| 36 | C | A | -1.3843 | |
| 37 | C | A | 0.0000 | |
| 38 | P | A | 0.3791 | |
| 39 | V | A | 0.8294 | |
| 40 | G | A | -0.1709 | |
| 41 | C | A | -0.0820 | |
| 42 | A | A | -0.8798 | |
| 43 | K | A | -1.5966 | |
| 44 | C | A | 0.0000 | |
| 45 | S | A | -0.8441 | |
| 46 | Q | A | -1.4946 | |
| 47 | G | A | -0.5437 | |
| 48 | C | A | 0.2194 | |
| 49 | I | A | 0.7988 | |
| 50 | C | A | -0.5594 | |
| 51 | K | A | -2.2750 | |
| 52 | E | A | -2.7096 | |
| 53 | A | A | -2.0608 | |
| 54 | S | A | -2.2565 | |
| 55 | D | A | -2.8842 | |
| 56 | K | A | -2.8722 | |
| 57 | C | A | -1.3529 | |
| 58 | S | A | -0.4846 | |
| 59 | C | A | -0.0670 | |
| 60 | C | A | -0.1072 | |
| 61 | A | A | -0.0802 |