| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKFGDTENPTSYQHETEDVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPDAPPPSPLYTPPPPTSPYATPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQISTPEPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9488 | |
| 2 | L | A | 1.9741 | |
| 3 | P | A | 0.6540 | |
| 4 | P | A | 0.3498 | |
| 5 | T | A | 0.1091 | |
| 6 | T | A | 0.1305 | |
| 7 | P | A | 0.1637 | |
| 8 | V | A | 1.2188 | |
| 9 | A | A | 0.0267 | |
| 10 | K | A | -1.1375 | |
| 11 | V | A | -0.3700 | |
| 12 | Q | A | -1.5103 | |
| 13 | S | A | -1.6049 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4481 | |
| 16 | E | A | -2.4518 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4475 | |
| 20 | P | A | 0.1017 | |
| 21 | T | A | 0.1140 | |
| 22 | S | A | -0.1695 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0951 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1720 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7581 | |
| 31 | R | A | -2.6069 | |
| 32 | L | A | -0.7416 | |
| 33 | L | A | 1.2484 | |
| 34 | T | A | 1.4868 | |
| 35 | V | A | 2.0387 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1896 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6242 | |
| 40 | K | A | -1.6319 | |
| 41 | D | A | -0.9185 | |
| 42 | I | A | 0.8253 | |
| 43 | V | A | 1.0148 | |
| 44 | K | A | -1.1895 | |
| 45 | N | A | -1.9284 | |
| 46 | G | A | -1.2343 | |
| 47 | K | A | -0.9395 | |
| 48 | V | A | 1.4973 | |
| 49 | V | A | 2.0640 | |
| 50 | V | A | 1.2992 | |
| 51 | P | A | 0.4945 | |
| 52 | K | A | -0.6114 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1470 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4937 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3053 | |
| 70 | K | A | -1.8203 | |
| 71 | F | A | -0.6785 | |
| 72 | A | A | -0.5911 | |
| 73 | L | A | -0.8820 | |
| 74 | P | A | -1.2748 | |
| 75 | Q | A | -2.4814 | |
| 76 | K | A | -3.0963 | |
| 77 | D | A | -2.9894 | |
| 78 | F | A | -1.6433 | |
| 79 | Y | A | -1.9119 | |
| 80 | D | A | -2.7458 | |
| 81 | P | A | -2.3515 | |
| 82 | E | A | -3.0674 | |
| 83 | K | A | -3.4422 | |
| 84 | E | A | -2.5029 | |
| 85 | R | A | -1.3108 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6348 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9583 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3051 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6711 | |
| 99 | G | A | -0.5320 | |
| 100 | P | A | -0.4339 | |
| 101 | L | A | -0.0126 | |
| 102 | G | A | -0.2987 | |
| 103 | K | A | -0.7997 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4741 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1011 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3336 | |
| 110 | L | A | 0.3571 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0150 | |
| 113 | K | A | -0.2672 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.2505 | |
| 116 | D | A | -1.8305 | |
| 117 | T | A | -1.3597 | |
| 118 | E | A | -2.6262 | |
| 119 | N | A | -2.4434 | |
| 120 | P | A | -1.7449 | |
| 121 | T | A | -0.9986 | |
| 122 | S | A | -0.7678 | |
| 123 | Y | A | -0.3762 | |
| 124 | Q | A | -1.6848 | |
| 125 | H | A | -2.2268 | |
| 126 | E | A | -2.6432 | |
| 127 | T | A | -2.2935 | |
| 128 | E | A | -3.1132 | |
| 129 | D | A | -2.7869 | |
| 130 | V | A | -1.5498 | |
| 131 | R | A | -0.9870 | |
| 132 | V | A | 0.3000 | |
| 133 | S | A | 0.1938 | |
| 134 | F | A | 0.1415 | |
| 135 | S | A | -0.1295 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5686 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2038 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5410 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2472 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1714 | |
| 157 | D | A | 0.3569 | |
| 158 | L | A | 0.8280 | |
| 159 | A | A | 0.1788 | |
| 160 | E | A | -1.4390 | |
| 161 | P | A | -0.1970 | |
| 162 | C | A | 0.1986 | |
| 163 | P | A | -0.1585 | |
| 164 | G | A | -0.0598 | |
| 165 | L | A | 0.6159 | |
| 166 | P | A | -0.1030 | |
| 167 | P | A | -0.3353 | |
| 168 | G | A | -0.4186 | |
| 169 | A | A | -0.0167 | |
| 170 | C | A | 0.6669 | |
| 171 | P | A | 0.5360 | |
| 172 | P | A | 0.7807 | |
| 173 | I | A | 1.9886 | |
| 174 | Q | A | 0.8578 | |
| 175 | L | A | 1.5084 | |
| 176 | V | A | 0.8519 | |
| 177 | N | A | -0.3643 | |
| 178 | S | A | -0.0125 | |
| 179 | V | A | 0.3594 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3625 | |
| 182 | D | A | 0.0724 | |
| 183 | G | A | -0.1550 | |
| 184 | D | A | -0.5543 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1321 | |
| 190 | F | A | 0.0558 | |
| 191 | G | A | -0.1090 | |
| 192 | N | A | -0.2621 | |
| 193 | M | A | -0.1158 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3973 | |
| 197 | E | A | -2.5792 | |
| 198 | L | A | -1.2156 | |
| 199 | Q | A | -2.5549 | |
| 200 | Q | A | -3.3507 | |
| 201 | D | A | -3.6080 | |
| 202 | R | A | -3.3409 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1967 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3679 | |
| 211 | S | A | -1.8916 | |
| 212 | T | A | -1.4345 | |
| 213 | R | A | -2.0814 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1685 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2629 | |
| 220 | L | A | 0.4545 | |
| 221 | K | A | -1.3982 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9958 | |
| 224 | N | A | -1.6104 | |
| 225 | E | A | -1.3472 | |
| 226 | A | A | -0.6721 | |
| 227 | Y | A | -0.4633 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6961 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1388 | |
| 234 | F | A | 0.0354 | |
| 235 | G | A | -0.9132 | |
| 236 | R | A | -2.6416 | |
| 237 | R | A | -2.8863 | |
| 238 | E | A | -2.0884 | |
| 239 | Q | A | -0.1469 | |
| 240 | V | A | 1.5033 | |
| 241 | Y | A | 1.2323 | |
| 242 | A | A | 0.1590 | |
| 243 | R | A | -1.3331 | |
| 244 | H | A | -1.2117 | |
| 245 | F | A | -0.2198 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6653 | |
| 249 | A | A | -1.1692 | |
| 250 | G | A | -0.9999 | |
| 251 | P | A | -1.0785 | |
| 252 | E | A | -1.3113 | |
| 253 | G | A | -1.2492 | |
| 254 | H | A | -1.4464 | |
| 255 | P | A | -1.2397 | |
| 256 | L | A | -0.3007 | |
| 257 | P | A | -0.8723 | |
| 258 | D | A | -1.7265 | |
| 259 | A | A | -0.7955 | |
| 260 | P | A | -0.9469 | |
| 261 | P | A | -0.7611 | |
| 262 | P | A | -0.3252 | |
| 263 | S | A | -0.1752 | |
| 264 | P | A | 0.4367 | |
| 265 | L | A | 1.3756 | |
| 266 | Y | A | 0.6843 | |
| 267 | T | A | 0.1082 | |
| 268 | P | A | -0.2433 | |
| 269 | P | A | -0.0191 | |
| 270 | P | A | -0.2936 | |
| 271 | P | A | -0.2916 | |
| 272 | T | A | -0.1536 | |
| 273 | S | A | 0.0727 | |
| 274 | P | A | 0.0912 | |
| 275 | Y | A | 1.0236 | |
| 276 | A | A | 0.3094 | |
| 277 | T | A | 0.1366 | |
| 278 | P | A | 0.1581 | |
| 279 | P | A | -0.5822 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3468 | |
| 282 | D | A | -0.8170 | |
| 283 | Y | A | 0.8596 | |
| 284 | F | A | 0.7243 | |
| 285 | G | A | 0.1515 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8990 | |
| 291 | L | A | 1.6033 | |
| 292 | V | A | 0.6101 | |
| 293 | S | A | -0.1482 | |
| 294 | S | A | -0.9673 | |
| 295 | D | A | -1.8407 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1225 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6322 | |
| 301 | R | A | -1.8667 | |
| 302 | P | A | -0.9588 | |
| 303 | F | A | -0.1785 | |
| 304 | W | A | -0.5169 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0788 | |
| 307 | R | A | -2.9257 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6587 | |
| 310 | G | A | -1.4287 | |
| 311 | N | A | -1.3978 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9599 | |
| 319 | N | A | -0.9116 | |
| 320 | E | A | -1.0618 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3740 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2057 | |
| 333 | N | A | 0.3985 | |
| 334 | F | A | 1.4593 | |
| 335 | T | A | 0.7820 | |
| 336 | I | A | 0.4023 | |
| 337 | S | A | -1.0144 | |
| 338 | Q | A | -1.8454 | |
| 339 | Q | A | -1.5179 | |
| 340 | I | A | 0.4973 | |
| 341 | S | A | -0.2042 | |
| 342 | T | A | -0.4845 | |
| 343 | P | A | -0.7972 | |
| 344 | E | A | -1.7677 | |
| 345 | P | A | -1.0879 | |
| 346 | N | A | -0.8750 | |
| 347 | V | A | 0.9553 | |
| 348 | Y | A | 1.0779 | |
| 349 | D | A | -0.2215 | |
| 350 | P | A | -0.6821 | |
| 351 | S | A | -0.5215 | |
| 352 | N | A | -0.7234 | |
| 353 | F | A | -1.0770 | |
| 354 | K | A | -2.0339 | |
| 355 | N | A | -1.7906 | |
| 356 | Y | A | 0.0436 | |
| 357 | L | A | 0.6631 | |
| 358 | R | A | 0.9402 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4880 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0176 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9004 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6683 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3095 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3288 | |
| 376 | L | A | -1.7577 | |
| 377 | D | A | -2.0486 | |
| 378 | P | A | -1.0699 | |
| 379 | G | A | -1.0243 | |
| 380 | V | A | -0.9307 | |
| 381 | L | A | -0.5441 | |
| 382 | A | A | -0.6610 | |
| 383 | H | A | -0.8432 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4027 | |
| 386 | T | A | -0.5658 | |
| 387 | M | A | -0.3284 | |
| 388 | N | A | -0.8680 | |
| 389 | P | A | -1.2849 | |
| 390 | T | A | -1.6131 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5612 | |
| 393 | E | A | -2.9946 | |
| 394 | N | A | -2.7961 | |
| 395 | W | A | -1.5645 | |
| 396 | N | A | -1.2046 | |
| 397 | L | A | -0.2251 | |
| 398 | G | A | 0.5267 | |
| 399 | F | A | 2.4194 | |
| 400 | V | A | 1.8511 | |
| 401 | P | A | 0.0617 | |
| 402 | P | A | -1.9824 | |
| 403 | K | A | -3.5550 | |
| 404 | E | A | -4.1294 | |
| 405 | R | A | -4.6967 | |
| 406 | E | A | -4.1451 | |
| 407 | D | A | -3.0452 | |
| 408 | P | A | -1.8609 | |
| 409 | Y | A | -0.9944 | |
| 410 | K | A | -2.0988 | |
| 411 | G | A | -0.6403 | |
| 412 | L | A | 0.6555 | |
| 413 | I | A | 1.5734 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3977 | |
| 416 | E | A | -1.6755 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8574 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9126 | |
| 421 | E | A | -2.5265 | |
| 422 | R | A | -2.1171 | |
| 423 | F | A | -1.0423 | |
| 424 | S | A | -1.3287 | |
| 425 | Q | A | -1.8415 | |
| 426 | D | A | -2.8902 | |
| 427 | L | A | -1.9941 | |
| 428 | D | A | -2.7866 | |
| 429 | Q | A | -2.6167 | |
| 430 | F | A | -1.4469 | |
| 431 | A | A | -0.9106 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6149 | |
| 435 | K | A | -0.7427 | |
| 436 | F | A | 0.1483 | |
| 437 | L | A | 1.0245 | |
| 438 | Y | A | 0.8204 | |
| 439 | Q | A | -0.2724 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine