| Chain sequence(s) |
F: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFHIEYAEPWVWGEAIVLTVPGSERSYDLTGLKPGTEYVVFIGGVKGGHNSTPLSAIFTTGGHHH
input PDB |
| Selected Chain(s) | F |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with F chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | F | 0.5711 | |
| 2 | L | F | -0.0334 | |
| 3 | P | F | -0.2986 | |
| 4 | A | F | -0.4800 | |
| 5 | P | F | 0.0000 | |
| 6 | K | F | -1.9557 | |
| 7 | N | F | -1.4169 | |
| 8 | L | F | 0.0515 | |
| 9 | V | F | 1.5557 | |
| 10 | V | F | 0.8692 | |
| 11 | S | F | -0.5175 | |
| 12 | R | F | -1.8202 | |
| 13 | V | F | -1.0785 | |
| 14 | T | F | -1.7298 | |
| 15 | E | F | -3.1629 | |
| 16 | D | F | -2.9999 | |
| 17 | S | F | -2.1561 | |
| 18 | A | F | 0.0000 | |
| 19 | R | F | -1.0748 | |
| 20 | L | F | 0.0000 | |
| 21 | S | F | -0.2702 | |
| 22 | W | F | 0.0000 | |
| 23 | T | F | -1.1938 | |
| 24 | A | F | -1.3455 | |
| 25 | P | F | -1.2942 | |
| 26 | D | F | -2.0359 | |
| 27 | A | F | -1.3348 | |
| 28 | A | F | -1.1282 | |
| 29 | F | F | 0.0000 | |
| 30 | D | F | -2.6788 | |
| 31 | S | F | -1.7174 | |
| 32 | F | F | 0.0000 | |
| 33 | H | F | -0.2850 | |
| 34 | I | F | 0.0000 | |
| 35 | E | F | 0.5873 | |
| 36 | Y | F | 0.7152 | |
| 37 | A | F | 0.0000 | |
| 38 | E | F | -0.6434 | |
| 39 | P | F | 0.3800 | |
| 40 | W | F | 1.3284 | |
| 41 | V | F | 0.8950 | |
| 42 | W | F | 0.9445 | |
| 43 | G | F | -0.3121 | |
| 44 | E | F | -1.0329 | |
| 45 | A | F | 0.6279 | |
| 46 | I | F | 2.3370 | |
| 47 | V | F | 2.4757 | |
| 48 | L | F | 1.2646 | |
| 49 | T | F | 0.1859 | |
| 50 | V | F | -0.6129 | |
| 51 | P | F | -1.2221 | |
| 52 | G | F | 0.0000 | |
| 53 | S | F | -1.7252 | |
| 54 | E | F | -2.0255 | |
| 55 | R | F | -1.0889 | |
| 56 | S | F | -0.5895 | |
| 57 | Y | F | -0.6348 | |
| 58 | D | F | -1.4793 | |
| 59 | L | F | 0.0000 | |
| 60 | T | F | -1.4201 | |
| 61 | G | F | -1.6024 | |
| 62 | L | F | 0.0000 | |
| 63 | K | F | -3.3552 | |
| 64 | P | F | -3.1662 | |
| 65 | G | F | -2.6073 | |
| 66 | T | F | 0.0000 | |
| 67 | E | F | -1.4723 | |
| 68 | Y | F | 0.0000 | |
| 69 | V | F | 0.0000 | |
| 70 | V | F | 0.0000 | |
| 71 | F | F | 0.4176 | |
| 72 | I | F | 0.0000 | |
| 73 | G | F | -0.5986 | |
| 74 | G | F | 0.0000 | |
| 75 | V | F | -1.9210 | |
| 76 | K | F | -2.5889 | |
| 77 | G | F | -2.1104 | |
| 78 | G | F | -1.9534 | |
| 79 | H | F | -1.9041 | |
| 80 | N | F | -2.0847 | |
| 81 | S | F | 0.0000 | |
| 82 | T | F | -0.1332 | |
| 83 | P | F | -0.6078 | |
| 84 | L | F | -0.3662 | |
| 85 | S | F | 0.4239 | |
| 86 | A | F | 1.4595 | |
| 87 | I | F | 1.9323 | |
| 88 | F | F | 0.0000 | |
| 89 | T | F | -0.8812 | |
| 90 | T | F | 0.0000 | |
| 91 | G | F | -2.1434 | |
| 92 | G | F | -2.3697 | |
| 93 | H | F | -2.4293 | |
| 94 | H | F | -2.5790 | |
| 95 | H | F | -1.9693 |