| Chain sequence(s) |
B: KRKLSKDEQENYKKVLESKKDVEKALEEAGGKDVSKLTPYWQIVKEEVEMALKYFEEKLK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | VR22B |
| Energy difference between WT (input) and mutated protein (by FoldX) | 4.30497 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:01:51)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:57)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:09)
[INFO] Main: Simulation completed successfully. (00:03:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | B | -3.9422 | |
| 2 | R | B | -4.2944 | |
| 3 | K | B | -3.4661 | |
| 4 | L | B | 0.0000 | |
| 5 | S | B | -2.8210 | |
| 6 | K | B | -3.6797 | |
| 7 | D | B | -4.0225 | |
| 8 | E | B | -3.6798 | |
| 9 | Q | B | -4.0662 | |
| 10 | E | B | -4.1810 | |
| 11 | N | B | -3.6212 | |
| 12 | Y | B | -2.7614 | |
| 13 | K | B | -3.8338 | |
| 14 | K | B | -3.8468 | |
| 15 | V | B | 0.0000 | |
| 16 | L | B | -2.6109 | |
| 17 | E | B | -4.0046 | |
| 18 | S | B | -3.6451 | |
| 19 | K | B | -3.9858 | |
| 20 | K | B | -4.4202 | |
| 21 | D | B | -4.3938 | |
| 22 | R | B | -3.9159 | mutated: VR22B |
| 23 | E | B | -4.4434 | |
| 24 | K | B | -4.7216 | |
| 25 | A | B | 0.0000 | |
| 26 | L | B | 0.0000 | |
| 27 | E | B | -4.5805 | |
| 28 | E | B | -3.8995 | |
| 29 | A | B | -3.1238 | |
| 30 | G | B | -2.6535 | |
| 31 | G | B | -3.2143 | |
| 32 | K | B | -3.7860 | |
| 33 | D | B | -3.1510 | |
| 34 | V | B | -1.6138 | |
| 35 | S | B | -1.6179 | |
| 36 | K | B | -2.7590 | |
| 37 | L | B | 0.0000 | |
| 38 | T | B | 0.1307 | |
| 39 | P | B | 0.5695 | |
| 40 | Y | B | 1.5991 | |
| 41 | W | B | 0.2946 | |
| 42 | Q | B | -0.0363 | |
| 43 | I | B | 0.9472 | |
| 44 | V | B | -0.6212 | |
| 45 | K | B | -1.9486 | |
| 46 | E | B | -2.5746 | |
| 47 | E | B | -2.7652 | |
| 48 | V | B | 0.0000 | |
| 49 | E | B | -2.4554 | |
| 50 | M | B | -1.4861 | |
| 51 | A | B | -1.2035 | |
| 52 | L | B | -1.6012 | |
| 53 | K | B | -1.6936 | |
| 54 | Y | B | -0.2839 | |
| 55 | F | B | -1.5509 | |
| 56 | E | B | -3.1241 | |
| 57 | E | B | -3.5363 | |
| 58 | K | B | -3.1148 | |
| 59 | L | B | -3.6156 | |
| 60 | K | B | -3.7961 |