Project name: initial [mutate: VR11A] [mutate: RV11A]

Status: done

Started: 2026-07-09 04:59:43
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Chain sequence(s) A: GIPEFKQKALRAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKYSEWTSPAEDS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues RV11A
Energy difference between WT (input) and mutated protein (by FoldX) 1.34699 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:53)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:59)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:53)
Show buried residues

Minimal score value
-3.7519
Maximal score value
2.0336
Average score
-1.1053
Total score value
-111.6374

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2545
2 I A 1.4476
3 P A 0.1755
4 E A -1.4046
5 F A -0.2795
6 K A -1.8742
7 Q A -2.2446
8 K A -2.2308
9 A A -0.4081
10 L A 1.1466
11 V A 2.0336 mutated: RV11A
12 A A 0.5549
13 K A -0.6954
14 V A 0.1738
15 S A -1.1892
16 Q A -1.6821
17 R A -2.6492
18 E A -3.3670
19 E A -3.3302
20 M A 0.0000
21 V A -3.0779
22 K A -3.6454
23 K A -2.9607
24 C A 0.0000
25 L A -1.7327
26 G A -1.7679
27 E A -1.8785
28 L A 0.0000
29 T A -1.4333
30 E A -2.5569
31 V A 0.0000
32 C A 0.0000
33 K A -2.0486
34 S A -1.4151
35 L A 0.0000
36 G A 0.0000
37 K A -1.0663
38 V A 1.1103
39 F A 0.9595
40 G A 0.1503
41 V A 0.1527
42 H A -0.5040
43 Y A -0.4926
44 F A 1.0485
45 N A 0.0446
46 I A 0.0000
47 F A 0.0000
48 N A -1.2204
49 T A -0.7043
50 V A -1.0588
51 T A 0.0000
52 L A 0.0000
53 K A -2.2258
54 K A -2.2693
55 L A 0.0000
56 A A 0.0000
57 E A -2.8996
58 S A -1.3931
59 L A 0.0000
60 S A -0.9543
61 S A -1.1161
62 D A -1.0837
63 P A -1.6453
64 E A -2.1520
65 V A -0.9293
66 L A 0.0000
67 L A -2.0214
68 Q A -2.0763
69 I A 0.0000
70 D A -2.5863
71 G A -1.7486
72 V A 0.0000
73 T A -2.6532
74 E A -3.7519
75 D A -3.7406
76 K A -2.7388
77 L A -2.8509
78 E A -3.6579
79 K A -2.9628
80 Y A 0.0000
81 G A 0.0000
82 A A -1.0960
83 E A -1.2790
84 V A 0.0000
85 I A -0.5323
86 S A -0.6815
87 V A -0.8341
88 L A 0.0000
89 Q A -1.8166
90 K A -1.6068
91 Y A 0.0000
92 S A -1.3821
93 E A -2.5000
94 W A -0.7351
95 T A -0.6475
96 S A -0.7590
97 P A -1.0710
98 A A -1.9271
99 E A -3.1596
100 D A -2.9994
101 S A -1.4872
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Laboratory of Theory of Biopolymers 2018