| Chain sequence(s) |
A: NFAAVNFAAVNFAAVNFAAVNFAAVHAVNFAAVHAVNFAAVNFAAVHAVHAV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.0431 | |
| 2 | F | A | 1.9266 | |
| 3 | A | A | 1.2614 | |
| 4 | A | A | 1.6102 | |
| 5 | V | A | 2.3978 | |
| 6 | N | A | 1.5106 | |
| 7 | F | A | 2.9294 | |
| 8 | A | A | 2.3064 | |
| 9 | A | A | 2.2579 | |
| 10 | V | A | 2.8510 | |
| 11 | N | A | 2.1867 | |
| 12 | F | A | 3.0252 | |
| 13 | A | A | 2.4074 | |
| 14 | A | A | 2.3830 | |
| 15 | V | A | 2.9451 | |
| 16 | N | A | 2.1884 | |
| 17 | F | A | 3.0541 | |
| 18 | A | A | 2.4270 | |
| 19 | A | A | 2.2016 | |
| 20 | V | A | 2.9605 | |
| 21 | N | A | 2.0739 | |
| 22 | F | A | 2.9555 | |
| 23 | A | A | 2.0249 | |
| 24 | A | A | 2.0128 | |
| 25 | V | A | 2.6917 | |
| 26 | H | A | 1.3256 | |
| 27 | A | A | 1.5961 | |
| 28 | V | A | 2.5801 | |
| 29 | N | A | 1.2165 | |
| 30 | F | A | 2.5244 | |
| 31 | A | A | 1.6987 | |
| 32 | A | A | 1.7467 | |
| 33 | V | A | 2.5327 | |
| 34 | H | A | 1.1887 | |
| 35 | A | A | 1.6925 | |
| 36 | V | A | 2.5269 | |
| 37 | N | A | 1.3316 | |
| 38 | F | A | 2.5288 | |
| 39 | A | A | 1.9545 | |
| 40 | A | A | 1.9489 | |
| 41 | V | A | 2.5496 | |
| 42 | N | A | 1.3419 | |
| 43 | F | A | 2.3315 | |
| 44 | A | A | 1.8289 | |
| 45 | A | A | 1.4031 | |
| 46 | V | A | 1.8951 | |
| 47 | H | A | 0.7427 | |
| 48 | A | A | 1.0867 | |
| 49 | V | A | 2.0015 | |
| 50 | H | A | 0.4858 | |
| 51 | A | A | 0.8730 | |
| 52 | V | A | 1.9007 |