Project name: query_structure

Status: done

Started: 2026-03-17 00:16:07
Settings
Chain sequence(s) A: NFAAVNFAAVNFAAVNFAAVNFAAVHAVNFAAVHAVNFAAVNFAAVHAVHAV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-0.0431
Maximal score value
3.0541
Average score
1.9881
Total score value
103.3792

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.0431
2 F A 1.9266
3 A A 1.2614
4 A A 1.6102
5 V A 2.3978
6 N A 1.5106
7 F A 2.9294
8 A A 2.3064
9 A A 2.2579
10 V A 2.8510
11 N A 2.1867
12 F A 3.0252
13 A A 2.4074
14 A A 2.3830
15 V A 2.9451
16 N A 2.1884
17 F A 3.0541
18 A A 2.4270
19 A A 2.2016
20 V A 2.9605
21 N A 2.0739
22 F A 2.9555
23 A A 2.0249
24 A A 2.0128
25 V A 2.6917
26 H A 1.3256
27 A A 1.5961
28 V A 2.5801
29 N A 1.2165
30 F A 2.5244
31 A A 1.6987
32 A A 1.7467
33 V A 2.5327
34 H A 1.1887
35 A A 1.6925
36 V A 2.5269
37 N A 1.3316
38 F A 2.5288
39 A A 1.9545
40 A A 1.9489
41 V A 2.5496
42 N A 1.3419
43 F A 2.3315
44 A A 1.8289
45 A A 1.4031
46 V A 1.8951
47 H A 0.7427
48 A A 1.0867
49 V A 2.0015
50 H A 0.4858
51 A A 0.8730
52 V A 1.9007
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Laboratory of Theory of Biopolymers 2018