Project name: P2F9

Status: done

Started: 2026-01-15 09:59:45
Settings
Chain sequence(s) A: QVQLVESGGGLVQAGGSLRLSCAASGSIFSINAMGWFRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCVDDSWYGYEYDYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:49)
Show buried residues

Minimal score value
-3.3197
Maximal score value
1.627
Average score
-0.6118
Total score value
-72.1973

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.6459
2 V A -1.2091
3 Q A -1.0744
4 L A 0.0000
5 V A 1.0944
6 E A 0.1797
7 S A -0.3591
8 G A -0.7846
9 G A -0.4802
11 G A 0.2188
12 L A 1.1590
13 V A 0.0618
14 Q A -1.2021
15 A A -1.5692
16 G A -1.2833
17 G A -1.0537
18 S A -1.0845
19 L A -0.6918
20 R A -1.5003
21 L A 0.0000
22 S A -0.3195
23 C A 0.0000
24 A A -0.1406
25 A A -0.3782
26 S A -0.7689
27 G A -0.6994
28 S A -0.0862
29 I A 0.0000
30 F A 1.6270
35 S A 0.9473
36 I A 1.0191
37 N A 0.5008
38 A A 0.0588
39 M A 0.0000
40 G A 0.0000
41 W A 0.0000
42 F A 0.1158
43 R A 0.0000
44 Q A -1.8144
45 A A -1.8714
46 P A -1.4558
47 G A -1.9077
48 K A -3.2236
49 E A -3.3197
50 R A -2.1533
51 E A -1.4902
52 L A -0.4321
53 V A 0.0000
54 A A 0.0000
55 A A -0.4689
56 I A 0.0000
57 T A -0.6915
58 S A -0.1345
59 G A -0.6183
63 G A -0.8424
64 S A -0.8191
65 T A -0.8919
66 N A -1.6327
67 Y A -1.4625
68 A A -1.5684
69 D A -2.5968
70 S A -1.7006
71 V A 0.0000
72 K A -2.8294
74 G A -1.7675
75 R A -1.5434
76 F A 0.0000
77 T A -1.0056
78 I A 0.0000
79 S A -0.4527
80 R A -0.7076
81 D A -1.0541
82 N A -0.7076
83 A A -0.9215
84 K A -2.1531
85 N A -1.1892
86 T A -0.8762
87 V A 0.0000
88 Y A -0.4387
89 L A 0.0000
90 Q A -1.0783
91 M A 0.0000
92 N A -1.2265
93 S A -1.1062
94 L A 0.0000
95 K A -2.0656
96 P A -1.7940
97 E A -2.2566
98 D A 0.0000
99 T A -0.7856
100 A A 0.0000
101 V A -0.2159
102 Y A 0.0000
103 Y A -0.0254
104 C A 0.0000
105 V A 0.0000
106 D A 0.0000
107 D A -0.1991
108 S A -0.0997
109 W A 1.4384
110 Y A 1.4974
112 G A 0.1767
113 Y A 0.6094
114 E A -1.2556
115 Y A -0.8220
116 D A -1.9144
117 Y A -1.0051
118 W A -0.0718
119 G A -0.0828
120 Q A -0.8530
121 G A -0.4156
122 T A -0.4574
123 Q A -0.4777
124 V A 0.0000
125 T A -0.1406
126 V A 0.0000
127 S A -0.6620
128 S A -0.8174
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Laboratory of Theory of Biopolymers 2018