Project name: query_structure

Status: done

Started: 2026-03-16 23:02:15
Settings
Chain sequence(s) A: CVATRNSCKPAAAACCDPCASCYCRFFRSACYCRVLSLNC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-2.5028
Maximal score value
1.7182
Average score
-0.1163
Total score value
-4.6517

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
93 C A 0.7202
94 V A 0.0000
95 A A -0.4669
96 T A -1.3232
97 R A -2.5028
98 N A -2.1450
99 S A -1.2501
100 C A 0.0000
101 K A -1.3544
102 P A -0.5976
103 A A -0.4251
104 A A -0.0293
105 A A 0.2389
106 A A 0.0016
107 C A -0.3302
108 C A 0.5298
109 D A -0.0126
110 P A -0.0063
111 C A 0.5467
112 A A 0.5229
113 S A 0.2151
114 C A 0.2076
115 Y A -0.1265
116 C A -0.4706
117 R A -0.6374
118 F A 1.4459
119 F A 1.4119
120 R A -0.7912
121 S A -0.4831
122 A A -0.4128
123 C A -0.8383
124 Y A -1.5069
125 C A 0.0000
126 R A -0.7651
127 V A 0.7316
128 L A 1.7182
129 S A 1.1113
130 L A 1.5152
131 N A 0.1024
132 C A 0.8044
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Laboratory of Theory of Biopolymers 2018