| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGMGSKDLLKVELTTPNGEKVEVSLLDVLTEALRRALEKLKDLPEEERYEIMRKINAGISLKGLIEAFGGNQTRAALMMGINRGTLRKKLKKYGMN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7280 | |
| 2 | G | A | -0.2008 | |
| 3 | S | A | -0.6754 | |
| 4 | S | A | -1.2048 | |
| 5 | H | A | -2.1315 | |
| 6 | H | A | -2.4567 | |
| 7 | H | A | -2.7104 | |
| 8 | H | A | -2.7080 | |
| 9 | H | A | -2.4471 | |
| 10 | H | A | -2.5687 | |
| 11 | S | A | -2.0086 | |
| 12 | S | A | -1.5523 | |
| 13 | G | A | -1.0261 | |
| 14 | E | A | -1.9464 | |
| 15 | N | A | -1.1402 | |
| 16 | L | A | 1.0935 | |
| 17 | Y | A | 1.8569 | |
| 18 | F | A | 1.1685 | |
| 19 | Q | A | -0.2438 | |
| 20 | G | A | -0.0766 | |
| 21 | M | A | 0.0955 | |
| 22 | G | A | -1.0704 | |
| 23 | S | A | -0.9220 | |
| 24 | K | A | -2.3929 | |
| 25 | D | A | -2.2095 | |
| 26 | L | A | -0.2123 | |
| 27 | L | A | -0.6702 | |
| 28 | K | A | -1.7733 | |
| 29 | V | A | -0.8215 | |
| 30 | E | A | -2.1072 | |
| 31 | L | A | -0.5858 | |
| 32 | T | A | -1.5582 | |
| 33 | T | A | -1.5010 | |
| 34 | P | A | -1.4457 | |
| 35 | N | A | -2.4097 | |
| 36 | G | A | -2.2078 | |
| 37 | E | A | -3.2642 | |
| 38 | K | A | -2.8817 | |
| 39 | V | A | -1.4433 | |
| 40 | E | A | -2.2487 | |
| 41 | V | A | -0.6141 | |
| 42 | S | A | -0.7007 | |
| 43 | L | A | 0.4960 | |
| 44 | L | A | 0.7159 | |
| 45 | D | A | -0.4826 | |
| 46 | V | A | 1.0788 | |
| 47 | L | A | 1.1771 | |
| 48 | T | A | -0.2655 | |
| 49 | E | A | -1.0629 | |
| 50 | A | A | -0.8226 | |
| 51 | L | A | -1.3200 | |
| 52 | R | A | -2.9883 | |
| 53 | R | A | -3.6895 | |
| 54 | A | A | -2.4594 | |
| 55 | L | A | -2.5987 | |
| 56 | E | A | -4.2308 | |
| 57 | K | A | -3.7635 | |
| 58 | L | A | -3.0198 | |
| 59 | K | A | -3.9374 | |
| 60 | D | A | -3.2057 | |
| 61 | L | A | -2.3224 | |
| 62 | P | A | -2.4988 | |
| 63 | E | A | -3.5725 | |
| 64 | E | A | -3.3321 | |
| 65 | E | A | -3.0074 | |
| 66 | R | A | -2.7157 | |
| 67 | Y | A | -1.3662 | |
| 68 | E | A | -2.7385 | |
| 69 | I | A | -1.5333 | |
| 70 | M | A | -1.1604 | |
| 71 | R | A | -2.7478 | |
| 72 | K | A | -2.3053 | |
| 73 | I | A | -0.2869 | |
| 74 | N | A | -1.2889 | |
| 75 | A | A | -1.2033 | |
| 76 | G | A | -0.6596 | |
| 77 | I | A | 0.9263 | |
| 78 | S | A | -0.1096 | |
| 79 | L | A | 0.0000 | |
| 80 | K | A | -1.6725 | |
| 81 | G | A | -1.0632 | |
| 82 | L | A | -0.8589 | |
| 83 | I | A | -1.6166 | |
| 84 | E | A | -2.4458 | |
| 85 | A | A | -1.2544 | |
| 86 | F | A | -0.9372 | |
| 87 | G | A | -1.4549 | |
| 88 | G | A | -1.8266 | |
| 89 | N | A | -1.7599 | |
| 90 | Q | A | -1.7923 | |
| 91 | T | A | -1.5493 | |
| 92 | R | A | -1.5439 | |
| 93 | A | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.7642 | |
| 96 | M | A | 1.2264 | |
| 97 | M | A | 0.3017 | |
| 98 | G | A | -0.3376 | |
| 99 | I | A | -0.0715 | |
| 100 | N | A | -1.7116 | |
| 101 | R | A | -2.7833 | |
| 102 | G | A | -2.4623 | |
| 103 | T | A | -2.4158 | |
| 104 | L | A | 0.0000 | |
| 105 | R | A | -4.4612 | |
| 106 | K | A | -4.4146 | |
| 107 | K | A | -3.6149 | |
| 108 | L | A | 0.0000 | |
| 109 | K | A | -4.2716 | |
| 110 | K | A | -3.8942 | |
| 111 | Y | A | -2.6910 | |
| 112 | G | A | -2.1621 | |
| 113 | M | A | -2.1674 | |
| 114 | N | A | -2.5855 |