| Chain sequence(s) |
A: GYSCRAVGVDGRAVTDIQGTCHAKATGAGAMASGTSEPGSTSTATATGRGATARSTSTGRGTATTTATGTASATSNAIGQGTATTTATGSAGGRATGSATTSSSASQPTQTQTITGPGFQTAKSFARNTATTTVTASHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.9469 | |
| 2 | Y | A | -0.4208 | |
| 3 | S | A | -0.7473 | |
| 4 | C | A | 0.0000 | |
| 5 | R | A | -1.7626 | |
| 6 | A | A | 0.0000 | |
| 7 | V | A | 1.1796 | |
| 8 | G | A | -0.1742 | |
| 9 | V | A | -0.2315 | |
| 10 | D | A | -2.3155 | |
| 11 | G | A | -1.9798 | |
| 12 | R | A | -2.2357 | |
| 13 | A | A | -0.9569 | |
| 14 | V | A | -0.4168 | |
| 15 | T | A | -0.4056 | |
| 16 | D | A | -0.3481 | |
| 17 | I | A | 0.6693 | |
| 18 | Q | A | -0.5412 | |
| 19 | G | A | -0.6840 | |
| 20 | T | A | -0.5183 | |
| 21 | C | A | 0.0000 | |
| 22 | H | A | -0.4688 | |
| 23 | A | A | 0.0000 | |
| 24 | K | A | -0.8798 | |
| 25 | A | A | 0.0000 | |
| 26 | T | A | -0.9623 | |
| 27 | G | A | -1.3098 | |
| 28 | A | A | -0.9640 | |
| 29 | G | A | -1.1035 | |
| 30 | A | A | 0.0000 | |
| 31 | M | A | -0.1358 | |
| 32 | A | A | 0.0000 | |
| 33 | S | A | -1.2538 | |
| 34 | G | A | 0.0000 | |
| 35 | T | A | -0.8708 | |
| 36 | S | A | 0.0000 | |
| 37 | E | A | -1.6155 | |
| 38 | P | A | -1.3186 | |
| 39 | G | A | -1.6323 | |
| 40 | S | A | 0.0000 | |
| 41 | T | A | -0.7916 | |
| 42 | S | A | 0.0000 | |
| 43 | T | A | -0.2286 | |
| 44 | A | A | 0.0000 | |
| 45 | T | A | -0.7408 | |
| 46 | A | A | 0.0000 | |
| 47 | T | A | -0.8080 | |
| 48 | G | A | -1.3703 | |
| 49 | R | A | -2.3225 | |
| 50 | G | A | -1.5504 | |
| 51 | A | A | 0.0000 | |
| 52 | T | A | -0.4366 | |
| 53 | A | A | 0.0000 | |
| 54 | R | A | -1.1992 | |
| 55 | S | A | 0.0000 | |
| 56 | T | A | -0.2550 | |
| 57 | S | A | 0.0000 | |
| 58 | T | A | -0.7722 | |
| 59 | G | A | -1.2731 | |
| 60 | R | A | -2.2059 | |
| 61 | G | A | 0.0000 | |
| 62 | T | A | -0.6419 | |
| 63 | A | A | 0.0000 | |
| 64 | T | A | -0.2805 | |
| 65 | T | A | 0.0000 | |
| 66 | T | A | -0.3209 | |
| 67 | A | A | 0.0000 | |
| 68 | T | A | -0.5008 | |
| 69 | G | A | -1.2278 | |
| 70 | T | A | -1.2722 | |
| 71 | A | A | 0.0000 | |
| 72 | S | A | -0.5675 | |
| 73 | A | A | 0.0000 | |
| 74 | T | A | -0.6822 | |
| 75 | S | A | 0.0000 | |
| 76 | N | A | 0.0150 | |
| 77 | A | A | 0.0000 | |
| 78 | I | A | 0.4710 | |
| 79 | G | A | -0.5970 | |
| 80 | Q | A | -1.2495 | |
| 81 | G | A | -1.2627 | |
| 82 | T | A | -0.7487 | |
| 83 | A | A | 0.0000 | |
| 84 | T | A | -0.1261 | |
| 85 | T | A | 0.0000 | |
| 86 | T | A | -0.0959 | |
| 87 | A | A | 0.0000 | |
| 88 | T | A | -0.4863 | |
| 89 | G | A | 0.0000 | |
| 90 | S | A | -1.0733 | |
| 91 | A | A | -1.0830 | |
| 92 | G | A | -1.4018 | |
| 93 | G | A | 0.0000 | |
| 94 | R | A | -1.5467 | |
| 95 | A | A | 0.0000 | |
| 96 | T | A | -0.4562 | |
| 97 | G | A | 0.0000 | |
| 98 | S | A | -0.7486 | |
| 99 | A | A | 0.0000 | |
| 100 | T | A | 0.0044 | |
| 101 | T | A | 0.0000 | |
| 102 | S | A | -0.3541 | |
| 103 | S | A | -0.8623 | |
| 104 | S | A | -0.3993 | |
| 105 | A | A | 0.0000 | |
| 106 | S | A | -0.6752 | |
| 107 | Q | A | -1.2827 | |
| 108 | P | A | -1.2902 | |
| 109 | T | A | -0.9043 | |
| 110 | Q | A | -0.8930 | |
| 111 | T | A | -0.5939 | |
| 112 | Q | A | -0.8449 | |
| 113 | T | A | -0.3350 | |
| 114 | I | A | 0.1429 | |
| 115 | T | A | 0.2785 | |
| 116 | G | A | -0.3523 | |
| 117 | P | A | -1.1956 | |
| 118 | G | A | 0.0000 | |
| 119 | F | A | 0.5853 | |
| 120 | Q | A | 0.3001 | |
| 121 | T | A | -0.2904 | |
| 122 | A | A | 0.0000 | |
| 123 | K | A | -1.5849 | |
| 124 | S | A | 0.0000 | |
| 125 | F | A | 0.1972 | |
| 126 | A | A | 0.0000 | |
| 127 | R | A | -1.4757 | |
| 128 | N | A | -1.8141 | |
| 129 | T | A | -0.9244 | |
| 130 | A | A | 0.0000 | |
| 131 | T | A | -0.5059 | |
| 132 | T | A | 0.0000 | |
| 133 | T | A | -0.3539 | |
| 134 | V | A | 0.0000 | |
| 135 | T | A | -0.0830 | |
| 136 | A | A | 0.0000 | |
| 137 | S | A | -1.2032 | |
| 138 | H | A | -2.0191 | |
| 139 | H | A | -2.2658 | |
| 140 | H | A | -1.9727 | |
| 141 | H | A | -2.4693 | |
| 142 | H | A | -2.2702 | |
| 143 | H | A | -1.7996 |