Project name: e88f4397feee93c [mutate: FY66A] [mutate: LQ123A, LS12A, FY30A]

Status: done

Started: 2024-07-05 06:47:14
Settings
Chain sequence(s) A: ELQLVESGGGLVQPGGSLRLSCAASRSIFGIYDMGWFRQAPGKEREWVSSVSNGVAYYADSVKGRFTISRDRAKNSVYLQMNSLRAEDTAVYYCRAVAHSTNTYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues FY30A,LQ123A,LS12A
Energy difference between WT (input) and mutated protein (by FoldX) 1.78809 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:18)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:25)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-3.663
Maximal score value
1.5016
Average score
-0.7096
Total score value
-81.6024

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.2305
2 L A -1.0346
3 Q A -0.5873
4 L A 0.4846
5 V A 1.2449
6 E A 0.1668
7 S A -0.5924
8 G A -1.3438
9 G A -1.1208
11 G A -0.7189
12 S A -0.4406 mutated: LS12A
13 V A -0.2519
14 Q A -1.5425
15 P A -1.4501
16 G A -1.4364
17 G A -1.3181
18 S A -1.5843
19 L A -1.5490
20 R A -2.5488
21 L A 0.0000
22 S A -0.5704
23 C A 0.0000
24 A A -0.0062
25 A A -0.3204
26 S A -1.0054
27 R A -1.8982
28 S A -1.0898
29 I A 0.0595
30 Y A 1.1801 mutated: FY30A
35 G A 0.6513
36 I A 0.4515
37 Y A 0.1128
38 D A 0.0043
39 M A 0.0000
40 G A 0.0000
41 W A 0.0000
42 F A 0.1018
43 R A 0.0000
44 Q A -2.2860
45 A A -2.0565
46 P A -1.4653
47 G A -1.8727
48 K A -3.4380
49 E A -3.6630
50 R A -2.6833
51 E A -1.9549
52 W A -0.4462
53 V A 0.0000
54 S A 0.0000
55 S A 0.7058
56 V A 0.0000
57 S A 0.0273
58 N A -1.1156
63 G A -0.3586
64 V A 1.2619
65 A A 1.1249
66 Y A 1.5016
67 Y A -0.1489
68 A A 0.0000
69 D A -2.2957
70 S A -1.6962
71 V A 0.0000
72 K A -2.2797
74 G A -1.7793
75 R A -1.9748
76 F A 0.0000
77 T A -1.0393
78 I A 0.0000
79 S A -0.4349
80 R A -1.2836
81 D A -1.7185
82 R A -2.1659
83 A A -1.6054
84 K A -2.3966
85 N A -1.6458
86 S A 0.0000
87 V A 0.0000
88 Y A -0.7034
89 L A 0.0000
90 Q A -2.0888
91 M A 0.0000
92 N A -2.4209
93 S A -1.5410
94 L A 0.0000
95 R A -2.1266
96 A A -1.1710
97 E A -1.5891
98 D A 0.0000
99 T A -0.8444
100 A A 0.0000
101 V A -0.4595
102 Y A 0.0000
103 Y A -0.3098
104 C A 0.0000
105 R A 0.1386
106 A A 0.0000
107 V A 0.0023
108 A A 0.0000
109 H A -0.9922
113 S A -0.7701
114 T A -0.7926
115 N A -0.8645
116 T A -0.1663
117 Y A 0.3494
118 W A 0.4269
119 G A 0.0000
120 Q A -0.8960
121 G A -0.9282
122 T A -0.9335
123 Q A -1.2019 mutated: LQ123A
124 V A 0.0000
125 T A -0.6568
126 V A -0.6448
127 S A -0.5722
128 S A -0.4800
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Laboratory of Theory of Biopolymers 2018