| Chain sequence(s) |
A: CTCKDKVCYLNGTPCAESCVYLPCFTGVIG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.8081 | |
| 2 | T | A | 0.1609 | |
| 3 | C | A | -0.4714 | |
| 4 | K | A | -2.5779 | |
| 5 | D | A | -3.0655 | |
| 6 | K | A | -2.5333 | |
| 7 | V | A | -1.1784 | |
| 8 | C | A | 0.0000 | |
| 9 | Y | A | 0.1963 | |
| 10 | L | A | 0.3968 | |
| 11 | N | A | -0.9606 | |
| 12 | G | A | -0.7205 | |
| 13 | T | A | -0.2048 | |
| 14 | P | A | -0.2911 | |
| 15 | C | A | 0.1649 | |
| 16 | A | A | -0.5276 | |
| 17 | E | A | -1.1460 | |
| 18 | S | A | 0.1057 | |
| 19 | C | A | 1.2262 | |
| 20 | V | A | 2.1797 | |
| 21 | Y | A | 2.1665 | |
| 22 | L | A | 2.0129 | |
| 23 | P | A | 1.4523 | |
| 24 | C | A | 1.7819 | |
| 25 | F | A | 2.3735 | |
| 26 | T | A | 1.4765 | |
| 27 | G | A | 1.7156 | |
| 28 | V | A | 2.6281 | |
| 29 | I | A | 2.6630 | |
| 30 | G | A | 0.8599 |