| Chain sequence(s) |
A: APKTYCEELKGTDTGQGGGGSATSSTPREAPYEGGGGSKQTGQQVSIAPNAGLDPVNGGGGSAPKTYCEELKGTDTGQGGGGSATSSTPREAPYEGGGGSDNAAVDASSGVEAAAG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | VA111A,AY104A,VS105A,CV68A,YT67A,ST46A,IY47A,LT53A,VS45A,YS5A,VT56A,AS48A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.110091 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:00:19)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:30)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.5077 | |
| 2 | P | A | -1.0968 | |
| 3 | K | A | -1.8142 | |
| 4 | T | A | -1.0879 | |
| 5 | S | A | -1.1525 | mutated: YS5A |
| 6 | C | A | -0.7643 | |
| 7 | E | A | -2.2130 | |
| 8 | E | A | -2.3336 | |
| 9 | L | A | -0.6684 | |
| 10 | K | A | -2.2768 | |
| 11 | G | A | -1.7295 | |
| 12 | T | A | -1.4929 | |
| 13 | D | A | -2.6021 | |
| 14 | T | A | -1.6686 | |
| 15 | G | A | -1.9209 | |
| 16 | Q | A | -2.0925 | |
| 17 | G | A | -1.6450 | |
| 18 | G | A | -1.4482 | |
| 19 | G | A | -1.2021 | |
| 20 | G | A | -0.8935 | |
| 21 | S | A | -0.6313 | |
| 22 | A | A | -0.3612 | |
| 23 | T | A | -0.3148 | |
| 24 | S | A | -0.4075 | |
| 25 | S | A | -0.6732 | |
| 26 | T | A | -0.9905 | |
| 27 | P | A | -1.6576 | |
| 28 | R | A | -2.9141 | |
| 29 | E | A | -2.6685 | |
| 30 | A | A | -1.1826 | |
| 31 | P | A | -0.5477 | |
| 32 | Y | A | -0.1108 | |
| 33 | E | A | -1.6472 | |
| 34 | G | A | -1.3318 | |
| 35 | G | A | -1.3852 | |
| 36 | G | A | -1.5432 | |
| 37 | G | A | -1.5958 | |
| 38 | S | A | -1.8042 | |
| 39 | K | A | -2.6931 | |
| 40 | Q | A | -2.6178 | |
| 41 | T | A | -1.9238 | |
| 42 | G | A | -1.9465 | |
| 43 | Q | A | -2.2592 | |
| 44 | Q | A | -1.9961 | |
| 45 | S | A | -0.9140 | mutated: VS45A |
| 46 | T | A | -0.0768 | mutated: ST46A |
| 47 | Y | A | 0.7546 | mutated: IY47A |
| 48 | S | A | -0.1142 | mutated: AS48A |
| 49 | P | A | -0.6836 | |
| 50 | N | A | -1.3627 | |
| 51 | A | A | -1.1183 | |
| 52 | G | A | -1.2773 | |
| 53 | T | A | -1.1963 | mutated: LT53A |
| 54 | D | A | -2.2265 | |
| 55 | P | A | -1.6406 | |
| 56 | T | A | -1.3465 | mutated: VT56A |
| 57 | N | A | -1.9675 | |
| 58 | G | A | -1.5805 | |
| 59 | G | A | -1.3746 | |
| 60 | G | A | -1.2241 | |
| 61 | G | A | -1.0025 | |
| 62 | S | A | -0.8080 | |
| 63 | A | A | -0.8595 | |
| 64 | P | A | -1.1839 | |
| 65 | K | A | -1.6580 | |
| 66 | T | A | -0.7512 | |
| 67 | T | A | -0.5900 | mutated: YT67A |
| 68 | V | A | 0.3817 | mutated: CV68A |
| 69 | E | A | -1.6851 | |
| 70 | E | A | -2.0613 | |
| 71 | L | A | -0.5239 | |
| 72 | K | A | -2.3036 | |
| 73 | G | A | -1.6802 | |
| 74 | T | A | -1.4849 | |
| 75 | D | A | -2.5498 | |
| 76 | T | A | -1.6751 | |
| 77 | G | A | -1.8430 | |
| 78 | Q | A | -2.0974 | |
| 79 | G | A | -1.6054 | |
| 80 | G | A | -1.5093 | |
| 81 | G | A | -1.2271 | |
| 82 | G | A | -0.9039 | |
| 83 | S | A | -0.6348 | |
| 84 | A | A | -0.3667 | |
| 85 | T | A | -0.3536 | |
| 86 | S | A | -0.4207 | |
| 87 | S | A | -0.7589 | |
| 88 | T | A | -1.1791 | |
| 89 | P | A | -1.8090 | |
| 90 | R | A | -2.9097 | |
| 91 | E | A | -2.5674 | |
| 92 | A | A | -1.4399 | |
| 93 | P | A | -1.0405 | |
| 94 | Y | A | -0.2550 | |
| 95 | E | A | -1.6337 | |
| 96 | G | A | -1.3696 | |
| 97 | G | A | -1.2543 | |
| 98 | G | A | -1.2792 | |
| 99 | G | A | -1.4807 | |
| 100 | S | A | -1.7590 | |
| 101 | D | A | -2.6054 | |
| 102 | N | A | -1.9181 | |
| 103 | A | A | -0.5912 | |
| 104 | Y | A | 0.4225 | mutated: AY104A |
| 105 | S | A | -0.5971 | mutated: VS105A |
| 106 | D | A | -1.5631 | |
| 107 | A | A | -0.9560 | |
| 108 | S | A | -0.9351 | |
| 109 | S | A | -0.9684 | |
| 110 | G | A | -1.0658 | |
| 111 | A | A | -1.1250 | mutated: VA111A |
| 112 | E | A | -1.8945 | |
| 113 | A | A | -0.8280 | |
| 114 | A | A | -0.3829 | |
| 115 | A | A | -0.1412 | |
| 116 | G | A | -0.4242 |