| Chain sequence(s) |
A: LNLIAAACTSNGKMGIGINGNLPWRLRQEMAYFERLTKTSQMEGMKNAVVMGRKTWFSIPEKFRPLKDRVNVVLSSSLTECPPGADHLCSSLSEAVKLLSSPPLSQTVDMVWITGGSSVYKDGIDSPLCHRIYLTRIMKEIECDTFFPEFDLDRFKLVTDDAVSQDIQEEKGIQYKFEIYESS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:45)
[INFO] Main: Simulation completed successfully. (00:02:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.2004 | |
| 2 | N | A | -0.2668 | |
| 3 | L | A | 0.0000 | |
| 4 | I | A | 0.0000 | |
| 5 | A | A | 0.0000 | |
| 6 | A | A | 0.0000 | |
| 7 | A | A | 0.0000 | |
| 8 | C | A | 0.0000 | |
| 9 | T | A | -1.7137 | |
| 10 | S | A | 0.0000 | |
| 11 | N | A | -2.5859 | |
| 12 | G | A | -1.8038 | |
| 13 | K | A | -2.0296 | |
| 14 | M | A | -1.1242 | |
| 15 | G | A | 0.0000 | |
| 16 | I | A | 0.0000 | |
| 17 | G | A | 0.0000 | |
| 18 | I | A | -1.4918 | |
| 19 | N | A | -1.8780 | |
| 20 | G | A | -1.4738 | |
| 21 | N | A | -1.3457 | |
| 22 | L | A | -0.5986 | |
| 23 | P | A | -0.8548 | |
| 24 | W | A | 0.0000 | |
| 25 | R | A | -2.4664 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -2.7016 | |
| 28 | Q | A | -2.0935 | |
| 29 | E | A | 0.0000 | |
| 30 | M | A | -1.1168 | |
| 31 | A | A | -1.2073 | |
| 32 | Y | A | 0.0000 | |
| 33 | F | A | -0.9450 | |
| 34 | E | A | -2.1836 | |
| 35 | R | A | -2.1788 | |
| 36 | L | A | -1.0738 | |
| 37 | T | A | 0.0000 | |
| 38 | K | A | -2.8087 | |
| 39 | T | A | -1.9058 | |
| 40 | S | A | -1.6522 | |
| 41 | Q | A | -1.4846 | |
| 42 | M | A | -0.7680 | |
| 43 | E | A | -1.9749 | |
| 44 | G | A | -1.5193 | |
| 45 | M | A | -1.2508 | |
| 46 | K | A | -1.8970 | |
| 47 | N | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | M | A | 0.0000 | |
| 52 | G | A | -0.7297 | |
| 53 | R | A | -1.0680 | |
| 54 | K | A | -1.4351 | |
| 55 | T | A | -0.6727 | |
| 56 | W | A | 0.0000 | |
| 57 | F | A | 0.7661 | |
| 58 | S | A | -0.3819 | |
| 59 | I | A | -0.0519 | |
| 60 | P | A | -0.6240 | |
| 61 | E | A | -1.9995 | |
| 62 | K | A | -1.7923 | |
| 63 | F | A | 0.0444 | |
| 64 | R | A | -0.8160 | |
| 65 | P | A | -1.4591 | |
| 66 | L | A | -1.2157 | |
| 67 | K | A | -2.5295 | |
| 68 | D | A | -3.1449 | |
| 69 | R | A | 0.0000 | |
| 70 | V | A | 0.0000 | |
| 71 | N | A | 0.0000 | |
| 72 | V | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | L | A | -0.4956 | |
| 75 | S | A | -0.6859 | |
| 76 | S | A | -0.3665 | |
| 77 | S | A | -0.4900 | |
| 78 | L | A | -0.4349 | |
| 79 | T | A | -0.8073 | |
| 80 | E | A | -1.6847 | |
| 81 | C | A | -1.0510 | |
| 82 | P | A | 0.0000 | |
| 83 | P | A | -1.0253 | |
| 84 | G | A | -1.3164 | |
| 85 | A | A | -1.2003 | |
| 86 | D | A | -1.9630 | |
| 87 | H | A | -1.1200 | |
| 88 | L | A | -0.6903 | |
| 89 | C | A | 0.0000 | |
| 90 | S | A | -0.5333 | |
| 91 | S | A | -0.8365 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | -1.2771 | |
| 94 | E | A | -1.7480 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | -0.7263 | |
| 97 | K | A | -1.9094 | |
| 98 | L | A | -0.8270 | |
| 99 | L | A | -0.6601 | |
| 100 | S | A | -0.9772 | |
| 101 | S | A | -0.7530 | |
| 102 | P | A | -0.7246 | |
| 103 | P | A | -0.7805 | |
| 104 | L | A | 0.0000 | |
| 105 | S | A | -1.0247 | |
| 106 | Q | A | -1.5637 | |
| 107 | T | A | -1.0811 | |
| 108 | V | A | 0.0000 | |
| 109 | D | A | -0.9041 | |
| 110 | M | A | -0.1868 | |
| 111 | V | A | 0.2149 | |
| 112 | W | A | 0.0000 | |
| 113 | I | A | 0.0000 | |
| 114 | T | A | -0.0123 | |
| 115 | G | A | 0.0000 | |
| 116 | G | A | -0.8691 | |
| 117 | S | A | -0.8285 | |
| 118 | S | A | -1.3037 | |
| 119 | V | A | 0.0000 | |
| 120 | Y | A | 0.0000 | |
| 121 | K | A | -3.4082 | |
| 122 | D | A | -3.3555 | |
| 123 | G | A | 0.0000 | |
| 124 | I | A | 0.0000 | |
| 125 | D | A | -2.9322 | |
| 126 | S | A | 0.0000 | |
| 127 | P | A | -0.4910 | |
| 128 | L | A | 0.4027 | |
| 129 | C | A | 0.0000 | |
| 130 | H | A | -1.0538 | |
| 131 | R | A | -0.8183 | |
| 132 | I | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | T | A | 0.0000 | |
| 136 | R | A | -0.4263 | |
| 137 | I | A | 0.0000 | |
| 138 | M | A | -0.3671 | |
| 139 | K | A | -1.7729 | |
| 140 | E | A | -2.7598 | |
| 141 | I | A | -1.8225 | |
| 142 | E | A | -2.7357 | |
| 143 | C | A | 0.0000 | |
| 144 | D | A | -2.3875 | |
| 145 | T | A | -1.2801 | |
| 146 | F | A | -0.5367 | |
| 147 | F | A | 0.0000 | |
| 148 | P | A | 0.0000 | |
| 149 | E | A | -2.3350 | |
| 150 | F | A | -2.1129 | |
| 151 | D | A | -2.6778 | |
| 152 | L | A | -1.1944 | |
| 153 | D | A | -2.4107 | |
| 154 | R | A | -2.0423 | |
| 155 | F | A | 0.0000 | |
| 156 | K | A | -0.9579 | |
| 157 | L | A | 1.2085 | |
| 158 | V | A | 0.6264 | |
| 159 | T | A | -0.4278 | |
| 160 | D | A | -1.3859 | |
| 161 | D | A | -2.1417 | |
| 162 | A | A | -1.0436 | |
| 163 | V | A | -1.1896 | |
| 164 | S | A | -1.5582 | |
| 165 | Q | A | -2.2942 | |
| 166 | D | A | -2.0952 | |
| 167 | I | A | -0.5778 | |
| 168 | Q | A | -1.5963 | |
| 169 | E | A | -2.6828 | |
| 170 | E | A | -2.8657 | |
| 171 | K | A | -2.8893 | |
| 172 | G | A | -2.0204 | |
| 173 | I | A | -1.7698 | |
| 174 | Q | A | -1.5591 | |
| 175 | Y | A | 0.0000 | |
| 176 | K | A | -1.2533 | |
| 177 | F | A | 0.0000 | |
| 178 | E | A | -0.2986 | |
| 179 | I | A | 0.0000 | |
| 180 | Y | A | 0.0000 | |
| 181 | E | A | -0.7588 | |
| 182 | S | A | -1.1797 | |
| 183 | S | A | -1.1359 |