Chain sequence(s) |
A: KIWIKIWIKLLKIW
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | WF3A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.610587 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:17) [INFO] FoldX: Starting FoldX energy minimalization (00:00:22) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33) [INFO] Main: Simulation completed successfully. (00:00:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | 0.2642 | |
2 | I | A | 2.5216 | |
3 | F | A | 3.2521 | mutated: WF3A |
4 | I | A | 2.4674 | |
5 | K | A | 0.9465 | |
6 | I | A | 2.3286 | |
7 | W | A | 2.5218 | |
8 | I | A | 1.3763 | |
9 | K | A | 0.1227 | |
10 | L | A | 1.5351 | |
11 | L | A | 1.4231 | |
12 | K | A | 0.1522 | |
13 | I | A | 2.0025 | |
14 | W | A | 1.8475 |