| Chain sequence(s) |
A: MGEVQLVESGGGSVQAGGSLRLSCAASGMITPATLVIWFRQAPGKEREGVLAAIYKNSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAAIRAVIGRHIRPHIYWGQGTQVTVGGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:42)
[INFO] Main: Simulation completed successfully. (00:01:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5164 | |
| 2 | G | A | -0.8370 | |
| 3 | E | A | -1.7197 | |
| 4 | V | A | -0.1596 | |
| 5 | Q | A | -0.6521 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 1.1186 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.5905 | |
| 10 | G | A | -1.2108 | |
| 11 | G | A | -1.1233 | |
| 12 | G | A | -0.9204 | |
| 13 | S | A | -0.7411 | |
| 14 | V | A | -0.8863 | |
| 15 | Q | A | -1.8533 | |
| 16 | A | A | -1.9290 | |
| 17 | G | A | -1.4401 | |
| 18 | G | A | -1.0801 | |
| 19 | S | A | -1.2028 | |
| 20 | L | A | -1.1051 | |
| 21 | R | A | -2.0467 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.3609 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.0218 | |
| 26 | A | A | 0.0771 | |
| 27 | S | A | -0.4683 | |
| 28 | G | A | -0.2453 | |
| 29 | M | A | 0.7534 | |
| 30 | I | A | 0.0000 | |
| 31 | T | A | -0.3853 | |
| 32 | P | A | -1.0704 | |
| 33 | A | A | -0.2129 | |
| 34 | T | A | 0.0000 | |
| 35 | L | A | 0.3881 | |
| 36 | V | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | -0.2308 | |
| 40 | R | A | -1.0082 | |
| 41 | Q | A | -2.0309 | |
| 42 | A | A | -2.0375 | |
| 43 | P | A | -1.7024 | |
| 44 | G | A | -2.1079 | |
| 45 | K | A | -3.5226 | |
| 46 | E | A | -3.8293 | |
| 47 | R | A | -3.7860 | |
| 48 | E | A | -2.3804 | |
| 49 | G | A | -1.0157 | |
| 50 | V | A | 0.1911 | |
| 51 | L | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.7905 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | -0.3525 | |
| 56 | K | A | -2.0754 | |
| 57 | N | A | -2.0891 | |
| 58 | S | A | -0.8859 | |
| 59 | T | A | 0.0979 | |
| 60 | Y | A | 0.9637 | |
| 61 | Y | A | -0.1986 | |
| 62 | A | A | -0.9847 | |
| 63 | D | A | -2.2992 | |
| 64 | S | A | -1.7707 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.4462 | |
| 67 | G | A | -1.7890 | |
| 68 | R | A | -1.4027 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7109 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.5662 | |
| 73 | Q | A | -1.3978 | |
| 74 | D | A | -1.8285 | |
| 75 | N | A | -1.9688 | |
| 76 | A | A | -1.6047 | |
| 77 | K | A | -2.4182 | |
| 78 | N | A | -1.5775 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.6201 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.2132 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.4827 | |
| 86 | S | A | -1.2257 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.3953 | |
| 89 | P | A | -2.0583 | |
| 90 | E | A | -2.3901 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -1.1722 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | -0.4002 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.1004 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.5967 | |
| 101 | R | A | 0.6493 | |
| 102 | A | A | 1.2513 | |
| 103 | V | A | 2.1506 | |
| 104 | I | A | 2.5561 | |
| 105 | G | A | 0.2551 | |
| 106 | R | A | -1.5585 | |
| 107 | H | A | -0.9054 | |
| 108 | I | A | 0.7550 | |
| 109 | R | A | -1.2546 | |
| 110 | P | A | -0.4301 | |
| 111 | H | A | -0.3617 | |
| 112 | I | A | 0.7577 | |
| 113 | Y | A | 0.7304 | |
| 114 | W | A | 1.1438 | |
| 115 | G | A | 0.2788 | |
| 116 | Q | A | -0.7890 | |
| 117 | G | A | 0.0000 | |
| 118 | T | A | 0.0000 | |
| 119 | Q | A | -1.3786 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -1.0244 | |
| 122 | V | A | 0.0000 | |
| 123 | G | A | -1.5042 | |
| 124 | G | A | -1.6201 | |
| 125 | G | A | -1.3925 | |
| 126 | S | A | -0.7254 |