Project name: query_structure

Status: done

Started: 2026-03-17 00:07:15
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Chain sequence(s) A: MGEVQLVESGGGSVQAGGSLRLSCAASGMITPATLVIWFRQAPGKEREGVLAAIYKNSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAAIRAVIGRHIRPHIYWGQGTQVTVGGGS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:42)
Show buried residues

Minimal score value
-3.8293
Maximal score value
2.5561
Average score
-0.6672
Total score value
-84.0614

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.5164
2 G A -0.8370
3 E A -1.7197
4 V A -0.1596
5 Q A -0.6521
6 L A 0.0000
7 V A 1.1186
8 E A 0.0000
9 S A -0.5905
10 G A -1.2108
11 G A -1.1233
12 G A -0.9204
13 S A -0.7411
14 V A -0.8863
15 Q A -1.8533
16 A A -1.9290
17 G A -1.4401
18 G A -1.0801
19 S A -1.2028
20 L A -1.1051
21 R A -2.0467
22 L A 0.0000
23 S A -0.3609
24 C A 0.0000
25 A A -0.0218
26 A A 0.0771
27 S A -0.4683
28 G A -0.2453
29 M A 0.7534
30 I A 0.0000
31 T A -0.3853
32 P A -1.0704
33 A A -0.2129
34 T A 0.0000
35 L A 0.3881
36 V A 0.0000
37 I A 0.0000
38 W A 0.0000
39 F A -0.2308
40 R A -1.0082
41 Q A -2.0309
42 A A -2.0375
43 P A -1.7024
44 G A -2.1079
45 K A -3.5226
46 E A -3.8293
47 R A -3.7860
48 E A -2.3804
49 G A -1.0157
50 V A 0.1911
51 L A 0.0000
52 A A 0.0000
53 A A 0.7905
54 I A 0.0000
55 Y A -0.3525
56 K A -2.0754
57 N A -2.0891
58 S A -0.8859
59 T A 0.0979
60 Y A 0.9637
61 Y A -0.1986
62 A A -0.9847
63 D A -2.2992
64 S A -1.7707
65 V A 0.0000
66 K A -2.4462
67 G A -1.7890
68 R A -1.4027
69 F A 0.0000
70 T A -0.7109
71 I A 0.0000
72 S A -0.5662
73 Q A -1.3978
74 D A -1.8285
75 N A -1.9688
76 A A -1.6047
77 K A -2.4182
78 N A -1.5775
79 T A 0.0000
80 V A 0.0000
81 Y A -0.6201
82 L A 0.0000
83 Q A -1.2132
84 M A 0.0000
85 N A -1.4827
86 S A -1.2257
87 L A 0.0000
88 K A -2.3953
89 P A -2.0583
90 E A -2.3901
91 D A 0.0000
92 T A -1.1722
93 A A 0.0000
94 I A -0.4002
95 Y A 0.0000
96 Y A 0.1004
97 C A 0.0000
98 A A 0.0000
99 A A 0.0000
100 I A 0.5967
101 R A 0.6493
102 A A 1.2513
103 V A 2.1506
104 I A 2.5561
105 G A 0.2551
106 R A -1.5585
107 H A -0.9054
108 I A 0.7550
109 R A -1.2546
110 P A -0.4301
111 H A -0.3617
112 I A 0.7577
113 Y A 0.7304
114 W A 1.1438
115 G A 0.2788
116 Q A -0.7890
117 G A 0.0000
118 T A 0.0000
119 Q A -1.3786
120 V A 0.0000
121 T A -1.0244
122 V A 0.0000
123 G A -1.5042
124 G A -1.6201
125 G A -1.3925
126 S A -0.7254
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Laboratory of Theory of Biopolymers 2018