| Chain sequence(s) |
H: QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGVIWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALTYYDYEFAYWGQGTLVTVSA
L: DILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:06)
[INFO] Main: Simulation completed successfully. (00:02:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4342 | |
| 2 | V | H | -0.8269 | |
| 3 | Q | H | -1.5526 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -2.3028 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.7094 | |
| 8 | G | H | -0.7714 | |
| 9 | P | H | 0.3170 | |
| 11 | G | H | 0.5622 | |
| 12 | L | H | 1.3624 | |
| 13 | V | H | -0.2365 | |
| 14 | Q | H | -1.2778 | |
| 15 | P | H | -1.4009 | |
| 16 | S | H | -1.6025 | |
| 17 | Q | H | -2.0581 | |
| 18 | S | H | -1.7876 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7670 | |
| 21 | I | H | 0.0000 | |
| 22 | T | H | -0.5264 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1356 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.1819 | |
| 27 | G | H | -0.9576 | |
| 28 | F | H | -0.5469 | |
| 29 | S | H | -0.9745 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.9851 | |
| 36 | N | H | -0.8828 | |
| 37 | Y | H | 0.5180 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.3064 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -1.1749 | |
| 47 | G | H | -1.7293 | |
| 48 | K | H | -2.2061 | |
| 49 | G | H | -1.1586 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | 0.0000 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.2650 | |
| 58 | S | H | -0.6249 | |
| 59 | G | H | -1.0997 | |
| 63 | G | H | -1.5364 | |
| 64 | N | H | -1.7173 | |
| 65 | T | H | -1.0427 | |
| 66 | D | H | -0.5463 | |
| 67 | Y | H | -0.1868 | |
| 68 | N | H | -0.1271 | |
| 69 | T | H | -0.2060 | |
| 70 | P | H | -0.4039 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -0.4169 | |
| 74 | S | H | -0.6452 | |
| 75 | R | H | -1.1734 | |
| 76 | L | H | 0.0000 | |
| 77 | S | H | -1.0481 | |
| 78 | I | H | 0.0000 | |
| 79 | N | H | -1.8043 | |
| 80 | K | H | -1.5954 | |
| 81 | D | H | -2.0125 | |
| 82 | N | H | -2.5718 | |
| 83 | S | H | -1.8770 | |
| 84 | K | H | -2.4885 | |
| 85 | S | H | -1.7638 | |
| 86 | Q | H | -1.6115 | |
| 87 | V | H | 0.0000 | |
| 88 | F | H | -0.2687 | |
| 89 | F | H | 0.0000 | |
| 90 | K | H | -1.6848 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.0976 | |
| 93 | S | H | -1.5867 | |
| 94 | L | H | 0.0000 | |
| 95 | Q | H | -2.0564 | |
| 96 | S | H | -1.4824 | |
| 97 | N | H | -2.0345 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2485 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.9491 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | L | H | 1.0970 | |
| 109 | T | H | 1.2023 | |
| 110 | Y | H | 1.8923 | |
| 111 | Y | H | 1.9849 | |
| 112 | D | H | 0.0000 | |
| 113 | Y | H | 0.5920 | |
| 114 | E | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | 0.2220 | |
| 117 | Y | H | 0.1336 | |
| 118 | W | H | -0.5092 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6945 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.5756 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4206 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4217 | |
| 128 | A | H | -0.1735 | |
| 1 | D | L | -1.3623 | |
| 2 | I | L | 0.0000 | |
| 3 | L | L | 0.7406 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.1116 | |
| 6 | Q | L | 0.1106 | |
| 7 | S | L | 0.2093 | |
| 8 | P | L | 0.7980 | |
| 9 | V | L | 1.8261 | |
| 10 | I | L | 1.1288 | |
| 11 | L | L | 0.4173 | |
| 12 | S | L | -0.5342 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.7888 | |
| 15 | P | L | -1.7812 | |
| 16 | G | L | -2.0969 | |
| 17 | E | L | -2.8783 | |
| 18 | R | L | -3.1092 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.8410 | |
| 21 | F | L | 0.0000 | |
| 22 | S | L | -0.4821 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.6658 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.7373 | |
| 27 | Q | L | -1.1940 | |
| 28 | S | L | -1.2648 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -0.8800 | |
| 37 | T | L | -0.6242 | |
| 38 | N | L | -0.6206 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | R | L | -1.7446 | |
| 46 | T | L | -1.1784 | |
| 47 | N | L | -1.8028 | |
| 48 | G | L | -1.4864 | |
| 49 | S | L | -0.9651 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.6562 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.6657 | |
| 56 | Y | L | -0.5053 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -1.1747 | |
| 66 | E | L | -1.8614 | |
| 67 | S | L | -1.1008 | |
| 68 | I | L | -0.5481 | |
| 69 | S | L | -0.4820 | |
| 70 | G | L | -0.4479 | |
| 71 | I | L | -0.1836 | |
| 72 | P | L | -0.2676 | |
| 74 | S | L | -0.5111 | |
| 75 | R | L | -1.0247 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.8340 | |
| 78 | G | L | -0.7007 | |
| 79 | S | L | -0.7404 | |
| 80 | G | L | -0.8761 | |
| 83 | S | L | -0.9208 | |
| 84 | G | L | -1.0839 | |
| 85 | T | L | -1.4231 | |
| 86 | D | L | -1.7660 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6584 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.3655 | |
| 93 | S | L | -2.2686 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.9340 | |
| 96 | S | L | -1.5675 | |
| 97 | E | L | -1.8290 | |
| 98 | D | L | 0.0000 | |
| 99 | I | L | -0.3856 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.8739 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | -0.4744 | |
| 108 | N | L | -1.0406 | |
| 109 | N | L | -0.9537 | |
| 114 | W | L | 0.0181 | |
| 115 | P | L | -0.2449 | |
| 116 | T | L | 0.0000 | |
| 117 | T | L | -0.0158 | |
| 118 | F | L | 0.1958 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.0129 | |
| 121 | G | L | 0.0404 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.4682 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.8902 | |
| 126 | L | L | -1.1143 | |
| 127 | K | L | -1.8595 |