Chain sequence(s) |
H: QVQLQESGGGSVQAGGSLRLSCAASGSTYSSNCMGWFRQAPGKEREEVASMSIRSSNAYYSDSVKGRFTISHDGSKNTLYLQMNSLKAEDTAMYYCAAAYGGSRCDYNYRGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05) [INFO] Main: Simulation completed successfully. (00:01:06) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.7959 | |
2 | V | H | 0.0000 | |
3 | Q | H | -2.0923 | |
4 | L | H | -1.7968 | |
5 | Q | H | -1.9115 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.8870 | |
8 | G | H | -0.9144 | |
9 | G | H | -0.8609 | |
11 | G | H | -0.6868 | |
12 | S | H | -0.5801 | |
13 | V | H | -0.7243 | |
14 | Q | H | -1.5796 | |
15 | A | H | -1.5636 | |
16 | G | H | -1.3112 | |
17 | G | H | -1.0808 | |
18 | S | H | -1.0350 | |
19 | L | H | -0.6998 | |
20 | R | H | -1.2760 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.5698 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.0567 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.3062 | |
27 | G | H | -1.0666 | |
28 | S | H | -0.5464 | |
29 | T | H | 0.0176 | |
30 | Y | H | 0.9705 | |
35 | S | H | 0.3838 | |
36 | S | H | -0.0614 | |
37 | N | H | 0.0000 | |
38 | C | H | 0.0000 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | -0.9724 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.9097 | |
45 | A | H | -1.7065 | |
46 | P | H | -1.2675 | |
47 | G | H | -1.7849 | |
48 | K | H | -2.8937 | |
49 | E | H | -3.3182 | |
50 | R | H | -2.5354 | |
51 | E | H | -2.3050 | |
52 | E | H | -2.2906 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | S | H | 0.0000 | |
56 | M | H | 0.0000 | |
57 | S | H | -0.6223 | |
58 | I | H | -0.7918 | |
59 | R | H | -1.7961 | |
62 | S | H | -1.2906 | |
63 | S | H | -1.1288 | |
64 | N | H | -1.0739 | |
65 | A | H | 0.1506 | |
66 | Y | H | 0.5011 | |
67 | Y | H | -0.5132 | |
68 | S | H | -1.4981 | |
69 | D | H | -2.5272 | |
70 | S | H | -1.9659 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.3018 | |
74 | G | H | -1.6774 | |
75 | R | H | -1.5247 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.5208 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.3055 | |
80 | H | H | -0.7068 | |
81 | D | H | -1.3021 | |
82 | G | H | -1.5366 | |
83 | S | H | -1.4744 | |
84 | K | H | -2.2839 | |
85 | N | H | -1.4502 | |
86 | T | H | -1.1628 | |
87 | L | H | 0.0000 | |
88 | Y | H | -0.1982 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.7787 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.2075 | |
93 | S | H | -1.1889 | |
94 | L | H | 0.0000 | |
95 | K | H | -2.0766 | |
96 | A | H | -1.5838 | |
97 | E | H | -2.1116 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.9937 | |
100 | A | H | 0.0000 | |
101 | M | H | -0.3452 | |
102 | Y | H | 0.0000 | |
103 | Y | H | -0.9469 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0000 | |
107 | A | H | 0.0000 | |
108 | Y | H | -0.2281 | |
109 | G | H | -1.4026 | |
110 | G | H | -1.2815 | |
111 | S | H | -1.5863 | |
112 | R | H | -2.5968 | |
113 | C | H | -2.0043 | |
114 | D | H | -2.6131 | |
115 | Y | H | -1.7925 | |
116 | N | H | -1.9694 | |
117 | Y | H | -1.9034 | |
118 | R | H | -2.2584 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.7428 | |
121 | G | H | -1.1561 | |
122 | T | H | -0.8346 | |
123 | Q | H | -0.8170 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.8002 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.1087 | |
128 | S | H | -0.8529 |