| Chain sequence(s) |
A: SCSKLPSSVTLKSNKKLVDLFTHFNGTKVTTKEEFACRQAELSELIQRYELGTLPGRPSTLTASFSGNTLTINCGENGKSISFTVTITYPSSGTAPYPAIIGFGGGSIPQPDGVALINFNNDEIAKQTSSSSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALELTPAANIDTTKIGVTGCSRNGKGALVAGAFEKRIVLTIPQESGMGGSACWRISDYLKSQGYNIQTASEIVGEYPWFSTTFNSYVNKVEELPFDHHHLAALIAPRGLLVIDNVIDWLGPESCYGCMTAARRAWQALGVPDNMGYSQIGSHEHCAFPSSQQADLTAFVNKFLLGQSVNTAIFRSDFSANESQWIDWTTPTLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:51)
[INFO] Main: Simulation completed successfully. (00:06:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.5320 | |
| 2 | C | A | -0.5146 | |
| 3 | S | A | -1.1238 | |
| 4 | K | A | -1.9244 | |
| 5 | L | A | 0.0000 | |
| 6 | P | A | -0.8806 | |
| 7 | S | A | -0.5837 | |
| 8 | S | A | -0.2163 | |
| 9 | V | A | -0.0915 | |
| 10 | T | A | -0.3465 | |
| 11 | L | A | -0.8514 | |
| 12 | K | A | -2.2568 | |
| 13 | S | A | -2.4176 | |
| 14 | N | A | -2.3581 | |
| 15 | K | A | -2.9191 | |
| 16 | K | A | -2.4228 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | -0.7236 | |
| 19 | D | A | -0.8099 | |
| 20 | L | A | 0.0000 | |
| 21 | F | A | 0.0000 | |
| 22 | T | A | -1.0931 | |
| 23 | H | A | -1.0633 | |
| 24 | F | A | -0.4644 | |
| 25 | N | A | -1.5144 | |
| 26 | G | A | -1.4107 | |
| 27 | T | A | -1.4811 | |
| 28 | K | A | -2.1109 | |
| 29 | V | A | 0.0000 | |
| 30 | T | A | -1.2490 | |
| 31 | T | A | -1.7242 | |
| 32 | K | A | -2.3601 | |
| 33 | E | A | -2.6853 | |
| 34 | E | A | -2.1044 | |
| 35 | F | A | 0.0000 | |
| 36 | A | A | -1.1050 | |
| 37 | C | A | -0.9707 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.5845 | |
| 40 | A | A | -0.5485 | |
| 41 | E | A | -0.7333 | |
| 42 | L | A | 0.0000 | |
| 43 | S | A | -0.6463 | |
| 44 | E | A | -1.3550 | |
| 45 | L | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | Q | A | -0.7226 | |
| 48 | R | A | -0.8309 | |
| 49 | Y | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | T | A | -0.3488 | |
| 54 | L | A | -0.2595 | |
| 55 | P | A | -0.5294 | |
| 56 | G | A | -1.3357 | |
| 57 | R | A | -2.1140 | |
| 58 | P | A | 0.0000 | |
| 59 | S | A | -1.0589 | |
| 60 | T | A | -0.9146 | |
| 61 | L | A | -0.2388 | |
| 62 | T | A | 0.1132 | |
| 63 | A | A | 0.0189 | |
| 64 | S | A | 0.0564 | |
| 65 | F | A | 0.0056 | |
| 66 | S | A | -0.5577 | |
| 67 | G | A | -0.9164 | |
| 68 | N | A | -1.0564 | |
| 69 | T | A | -0.6987 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.2712 | |
| 72 | I | A | 0.0000 | |
| 73 | N | A | -0.5284 | |
| 74 | C | A | 0.0000 | |
| 75 | G | A | -1.4637 | |
| 76 | E | A | -1.8639 | |
| 77 | N | A | -2.1651 | |
| 78 | G | A | -2.0074 | |
| 79 | K | A | -2.7049 | |
| 80 | S | A | -1.7851 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.4007 | |
| 83 | F | A | 0.0000 | |
| 84 | T | A | -0.6087 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -0.7616 | |
| 87 | I | A | 0.0000 | |
| 88 | T | A | -0.2353 | |
| 89 | Y | A | -0.1766 | |
| 90 | P | A | -0.5902 | |
| 91 | S | A | -0.6413 | |
| 92 | S | A | -0.8652 | |
| 93 | G | A | -0.8272 | |
| 94 | T | A | -0.4508 | |
| 95 | A | A | -0.4412 | |
| 96 | P | A | -0.7397 | |
| 97 | Y | A | -0.3130 | |
| 98 | P | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | G | A | -1.4503 | |
| 105 | G | A | -1.0321 | |
| 106 | G | A | -0.5853 | |
| 107 | S | A | -0.2906 | |
| 108 | I | A | 0.0000 | |
| 109 | P | A | -0.6458 | |
| 110 | Q | A | -0.9935 | |
| 111 | P | A | -1.2690 | |
| 112 | D | A | -2.0405 | |
| 113 | G | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | A | A | 0.0000 | |
| 116 | L | A | -0.1195 | |
| 117 | I | A | 0.0000 | |
| 118 | N | A | -1.3511 | |
| 119 | F | A | 0.0000 | |
| 120 | N | A | -2.4877 | |
| 121 | N | A | 0.0000 | |
| 122 | D | A | -2.6999 | |
| 123 | E | A | -2.6901 | |
| 124 | I | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | K | A | -2.2571 | |
| 127 | Q | A | 0.0000 | |
| 128 | T | A | -0.6595 | |
| 129 | S | A | -0.6408 | |
| 130 | S | A | -0.7670 | |
| 131 | S | A | -0.8824 | |
| 132 | S | A | 0.0000 | |
| 133 | R | A | -1.3746 | |
| 134 | G | A | -1.5389 | |
| 135 | Q | A | -2.2899 | |
| 136 | G | A | -2.2117 | |
| 137 | K | A | -1.9045 | |
| 138 | F | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | D | A | -2.4793 | |
| 141 | L | A | 0.0000 | |
| 142 | Y | A | -1.0689 | |
| 143 | G | A | -1.2101 | |
| 144 | S | A | -1.2596 | |
| 145 | S | A | -0.6968 | |
| 146 | H | A | -0.5230 | |
| 147 | S | A | -0.3934 | |
| 148 | A | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | A | A | 0.0000 | |
| 151 | M | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | A | A | 0.0000 | |
| 154 | W | A | 0.0000 | |
| 155 | A | A | 0.0000 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | 0.0000 | |
| 158 | V | A | 0.0000 | |
| 159 | S | A | -0.7043 | |
| 160 | R | A | 0.0000 | |
| 161 | V | A | 0.0000 | |
| 162 | I | A | 0.0000 | |
| 163 | D | A | 0.0000 | |
| 164 | A | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | E | A | -1.1711 | |
| 167 | L | A | 0.6381 | |
| 168 | T | A | 0.0000 | |
| 169 | P | A | -0.5603 | |
| 170 | A | A | -0.3124 | |
| 171 | A | A | 0.0000 | |
| 172 | N | A | -0.8752 | |
| 173 | I | A | 0.0000 | |
| 174 | D | A | -0.9498 | |
| 175 | T | A | -1.0293 | |
| 176 | T | A | -0.7223 | |
| 177 | K | A | -0.6828 | |
| 178 | I | A | 0.0000 | |
| 179 | G | A | 0.0000 | |
| 180 | V | A | 0.0000 | |
| 181 | T | A | 0.0000 | |
| 182 | G | A | 0.0000 | |
| 183 | C | A | 0.0000 | |
| 184 | S | A | -0.7933 | |
| 185 | R | A | -1.3334 | |
| 186 | N | A | -1.0583 | |
| 187 | G | A | 0.0000 | |
| 188 | K | A | 0.0000 | |
| 189 | G | A | 0.0000 | |
| 190 | A | A | 0.0000 | |
| 191 | L | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | A | A | 0.0000 | |
| 194 | G | A | 0.0000 | |
| 195 | A | A | 0.0000 | |
| 196 | F | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | K | A | -1.9940 | |
| 199 | R | A | -1.5392 | |
| 200 | I | A | 0.0000 | |
| 201 | V | A | -0.3947 | |
| 202 | L | A | 0.0000 | |
| 203 | T | A | 0.0000 | |
| 204 | I | A | 0.0000 | |
| 205 | P | A | 0.0000 | |
| 206 | Q | A | 0.0000 | |
| 207 | E | A | 0.0000 | |
| 208 | S | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | M | A | 0.0000 | |
| 211 | G | A | 0.0000 | |
| 212 | G | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | A | A | 0.0000 | |
| 215 | C | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | R | A | 0.0000 | |
| 218 | I | A | 0.0000 | |
| 219 | S | A | 0.0000 | |
| 220 | D | A | -1.9160 | |
| 221 | Y | A | -0.7787 | |
| 222 | L | A | -0.9393 | |
| 223 | K | A | -1.5422 | |
| 224 | S | A | -1.3455 | |
| 225 | Q | A | -1.6570 | |
| 226 | G | A | -1.1399 | |
| 227 | Y | A | -0.8375 | |
| 228 | N | A | -1.3639 | |
| 229 | I | A | 0.0000 | |
| 230 | Q | A | 0.0000 | |
| 231 | T | A | 0.0000 | |
| 232 | A | A | 0.0000 | |
| 233 | S | A | -1.4980 | |
| 234 | E | A | -1.0103 | |
| 235 | I | A | 0.0000 | |
| 236 | V | A | -0.6281 | |
| 237 | G | A | -1.0184 | |
| 238 | E | A | -0.8747 | |
| 239 | Y | A | -0.6487 | |
| 240 | P | A | 0.0000 | |
| 241 | W | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | S | A | 0.0000 | |
| 244 | T | A | -0.6339 | |
| 245 | T | A | -0.6276 | |
| 246 | F | A | 0.0000 | |
| 247 | N | A | -1.7453 | |
| 248 | S | A | -1.2709 | |
| 249 | Y | A | -1.5002 | |
| 250 | V | A | 0.0000 | |
| 251 | N | A | -2.6817 | |
| 252 | K | A | -3.0964 | |
| 253 | V | A | 0.0000 | |
| 254 | E | A | -2.7096 | |
| 255 | E | A | -2.4531 | |
| 256 | L | A | 0.0000 | |
| 257 | P | A | 0.0000 | |
| 258 | F | A | 0.0000 | |
| 259 | D | A | 0.0000 | |
| 260 | H | A | 0.0000 | |
| 261 | H | A | 0.0000 | |
| 262 | H | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | A | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | L | A | 0.0000 | |
| 267 | I | A | 0.0000 | |
| 268 | A | A | 0.0000 | |
| 269 | P | A | -0.4958 | |
| 270 | R | A | -0.5285 | |
| 271 | G | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | L | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | I | A | 0.0000 | |
| 276 | D | A | 0.0000 | |
| 277 | N | A | 0.0000 | |
| 278 | V | A | -0.0929 | |
| 279 | I | A | -0.2144 | |
| 280 | D | A | -0.5764 | |
| 281 | W | A | -0.0410 | |
| 282 | L | A | 0.0000 | |
| 283 | G | A | 0.0000 | |
| 284 | P | A | 0.0000 | |
| 285 | E | A | -0.6471 | |
| 286 | S | A | 0.0000 | |
| 287 | C | A | 0.0000 | |
| 288 | Y | A | -0.3128 | |
| 289 | G | A | 0.0000 | |
| 290 | C | A | 0.0000 | |
| 291 | M | A | 0.0000 | |
| 292 | T | A | -0.3791 | |
| 293 | A | A | 0.0000 | |
| 294 | A | A | 0.0000 | |
| 295 | R | A | -0.7375 | |
| 296 | R | A | -0.8999 | |
| 297 | A | A | 0.0000 | |
| 298 | W | A | 0.0000 | |
| 299 | Q | A | -1.5220 | |
| 300 | A | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | G | A | -0.8492 | |
| 303 | V | A | -0.4976 | |
| 304 | P | A | -0.8412 | |
| 305 | D | A | -0.9574 | |
| 306 | N | A | -0.7791 | |
| 307 | M | A | 0.0000 | |
| 308 | G | A | 0.0000 | |
| 309 | Y | A | 0.0000 | |
| 310 | S | A | 0.0000 | |
| 311 | Q | A | 0.0000 | |
| 312 | I | A | 0.0398 | |
| 313 | G | A | -0.2145 | |
| 314 | S | A | -0.5782 | |
| 315 | H | A | -1.0074 | |
| 316 | E | A | -2.0239 | |
| 317 | H | A | -1.2963 | |
| 318 | C | A | -0.5681 | |
| 319 | A | A | -0.6254 | |
| 320 | F | A | -0.2518 | |
| 321 | P | A | -0.4469 | |
| 322 | S | A | -0.4361 | |
| 323 | S | A | -0.2999 | |
| 324 | Q | A | 0.0000 | |
| 325 | Q | A | -0.5963 | |
| 326 | A | A | -0.2533 | |
| 327 | D | A | 0.0000 | |
| 328 | L | A | 0.0000 | |
| 329 | T | A | -0.4515 | |
| 330 | A | A | -0.3976 | |
| 331 | F | A | 0.0000 | |
| 332 | V | A | 0.0000 | |
| 333 | N | A | -0.7799 | |
| 334 | K | A | -0.7496 | |
| 335 | F | A | -0.2069 | |
| 336 | L | A | 0.0000 | |
| 337 | L | A | -0.4097 | |
| 338 | G | A | -0.7851 | |
| 339 | Q | A | -1.1593 | |
| 340 | S | A | -0.7703 | |
| 341 | V | A | -0.5756 | |
| 342 | N | A | -1.2881 | |
| 343 | T | A | 0.0000 | |
| 344 | A | A | -0.4123 | |
| 345 | I | A | -0.1388 | |
| 346 | F | A | -0.0310 | |
| 347 | R | A | -0.8799 | |
| 348 | S | A | -1.0043 | |
| 349 | D | A | -1.7342 | |
| 350 | F | A | -0.7706 | |
| 351 | S | A | -0.8496 | |
| 352 | A | A | -0.8299 | |
| 353 | N | A | -1.1270 | |
| 354 | E | A | -1.7311 | |
| 355 | S | A | -1.4599 | |
| 356 | Q | A | -1.6296 | |
| 357 | W | A | 0.0000 | |
| 358 | I | A | 0.0000 | |
| 359 | D | A | -2.1841 | |
| 360 | W | A | -0.9437 | |
| 361 | T | A | -0.5063 | |
| 362 | T | A | -0.4255 | |
| 363 | P | A | -0.5407 | |
| 364 | T | A | -0.6197 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.9559 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine