| Chain sequence(s) |
A: PGCAFEGESCNVQFYPCCPGLGLTCIPGNPDGTCYYL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -0.0093 | |
| 2 | G | A | 0.3919 | |
| 3 | C | A | 1.2073 | |
| 4 | A | A | 0.0000 | |
| 5 | F | A | 0.8088 | |
| 6 | E | A | -0.8685 | |
| 7 | G | A | -1.2391 | |
| 8 | E | A | -1.7893 | |
| 9 | S | A | -0.8983 | |
| 10 | C | A | 0.0000 | |
| 11 | N | A | 0.2040 | |
| 12 | V | A | 0.7491 | |
| 13 | Q | A | 0.1200 | |
| 14 | F | A | 2.2374 | |
| 15 | Y | A | 1.8942 | |
| 16 | P | A | 1.1406 | |
| 17 | C | A | 0.6290 | |
| 18 | C | A | 0.5917 | |
| 19 | P | A | 0.2639 | |
| 20 | G | A | 0.1243 | |
| 21 | L | A | 1.5423 | |
| 22 | G | A | 1.2927 | |
| 23 | L | A | 0.0000 | |
| 24 | T | A | 1.4379 | |
| 25 | C | A | 0.5883 | |
| 26 | I | A | 0.9327 | |
| 27 | P | A | -0.1045 | |
| 28 | G | A | 0.0000 | |
| 29 | N | A | -1.7313 | |
| 30 | P | A | -1.4212 | |
| 31 | D | A | -1.9324 | |
| 32 | G | A | 0.0000 | |
| 33 | T | A | -0.3146 | |
| 34 | C | A | 0.0000 | |
| 35 | Y | A | 1.9091 | |
| 36 | Y | A | 2.6712 | |
| 37 | L | A | 2.6372 |