| Chain sequence(s) |
L: KLLLGENYPEFQD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 52 | K | L | -1.4183 | |
| 53 | L | L | 1.5202 | |
| 54 | L | L | 1.9756 | |
| 55 | L | L | 1.0135 | |
| 56 | G | L | -0.5741 | |
| 57 | E | L | -2.1194 | |
| 58 | N | L | -1.4106 | |
| 59 | Y | L | 0.7829 | |
| 60 | P | L | -0.3990 | |
| 61 | E | L | -1.8088 | |
| 62 | F | L | -0.2310 | |
| 63 | Q | L | -1.4662 | |
| 64 | D | L | -2.0073 |