| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWALSSVHAYFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVQYVDGFFKSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.5148 | |
| 2 | P | A | -0.3067 | |
| 3 | A | A | -0.9360 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9980 | |
| 6 | N | A | -1.4866 | |
| 7 | L | A | -0.1583 | |
| 8 | V | A | 1.2648 | |
| 9 | V | A | 0.7482 | |
| 10 | S | A | -0.5593 | |
| 11 | R | A | -1.9784 | |
| 12 | V | A | -0.9566 | |
| 13 | T | A | -1.7434 | |
| 14 | E | A | -2.9842 | |
| 15 | D | A | -2.6315 | |
| 16 | S | A | -1.9947 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1266 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.3294 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -0.6816 | |
| 23 | L | A | -0.1120 | |
| 24 | S | A | -0.3093 | |
| 25 | S | A | 0.3542 | |
| 26 | V | A | 1.4633 | |
| 27 | H | A | 0.1934 | |
| 28 | A | A | 0.7980 | |
| 29 | Y | A | 1.2417 | |
| 30 | F | A | 0.0000 | |
| 31 | D | A | 0.2269 | |
| 32 | S | A | -0.2923 | |
| 33 | F | A | 0.0000 | |
| 34 | L | A | 0.4991 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | 0.6407 | |
| 37 | Y | A | 0.4900 | |
| 38 | Q | A | -0.7476 | |
| 39 | E | A | -1.8117 | |
| 40 | S | A | -1.5493 | |
| 41 | E | A | -2.4407 | |
| 42 | K | A | -2.0176 | |
| 43 | V | A | -0.0175 | |
| 44 | G | A | -0.9513 | |
| 45 | E | A | -1.5754 | |
| 46 | A | A | -0.2146 | |
| 47 | I | A | 1.0735 | |
| 48 | V | A | 2.0292 | |
| 49 | L | A | 1.3984 | |
| 50 | T | A | 0.4736 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.7427 | |
| 53 | G | A | -0.5081 | |
| 54 | S | A | -0.6868 | |
| 55 | E | A | -1.0516 | |
| 56 | R | A | -0.8809 | |
| 57 | S | A | -0.5628 | |
| 58 | Y | A | -0.6253 | |
| 59 | D | A | -1.5565 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.3897 | |
| 62 | G | A | -1.4628 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.9866 | |
| 65 | P | A | -2.5323 | |
| 66 | G | A | -1.8574 | |
| 67 | T | A | -2.2507 | |
| 68 | E | A | -1.9972 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | 0.0276 | |
| 71 | V | A | 0.0000 | |
| 72 | S | A | 0.0000 | |
| 73 | I | A | 0.0000 | |
| 74 | Y | A | -0.2622 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | Q | A | 1.5046 | |
| 78 | Y | A | 2.1343 | |
| 79 | V | A | 1.8635 | |
| 80 | D | A | -0.2817 | |
| 81 | G | A | 0.8108 | |
| 82 | F | A | 2.4172 | |
| 83 | F | A | 1.7947 | |
| 84 | K | A | -0.0842 | |
| 85 | S | A | 0.0000 | |
| 86 | N | A | -1.3801 | |
| 87 | P | A | -0.9995 | |
| 88 | L | A | -0.7463 | |
| 89 | S | A | 0.0395 | |
| 90 | A | A | 1.1921 | |
| 91 | I | A | 1.8082 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -0.8341 | |
| 94 | T | A | -1.9133 |