Project name: 13bcacdbb05cef

Status: done

Started: 2026-02-12 14:01:19
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Chain sequence(s) A: FGGHKGF
C: FGGHKGF
B: FGGHKGF
E: FGGHKGF
D: FGGHKGF
G: FGGHKGF
F: FGGHKGF
I: FGGHKGF
H: FGGHKGF
K: FGGHKGF
J: FGGHKGF
L: FGGHKGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:13)
Show buried residues

Minimal score value
-2.4953
Maximal score value
4.2917
Average score
0.6396
Total score value
53.7251

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.8780
2 G A 0.9351
3 G A -0.8344
4 H A -2.2452
5 K A -1.9687
6 G A 0.4787
7 F A 2.4187
1 F B 3.1341
2 G B 1.0108
3 G B -0.7912
4 H B -2.0604
5 K B -1.8386
6 G B 0.0000
7 F B 2.5839
1 F C 3.9466
2 G C 1.8199
3 G C -0.1191
4 H C 0.0000
5 K C -1.2439
6 G C 0.0000
7 F C 1.9628
1 F D 4.1938
2 G D 1.9552
3 G D 0.1091
4 H D 0.0000
5 K D -1.2036
6 G D 0.0000
7 F D 1.8330
1 F E 4.2917
2 G E 2.0134
3 G E 0.0879
4 H E 0.0000
5 K E -1.1886
6 G E 0.0000
7 F E 1.8677
1 F F 4.0389
2 G F 1.7092
3 G F -0.4952
4 H F 0.0000
5 K F -1.7141
6 G F 0.0000
7 F F 1.7118
1 F G 3.1039
2 G G 0.8188
3 G G -0.9510
4 H G -2.4953
5 K G -2.1945
6 G G -0.0520
7 F G 1.8827
1 F H 2.8140
2 G H 0.6973
3 G H -0.9032
4 H H -2.1992
5 K H -1.8220
6 G H 0.7178
7 F H 2.6291
1 F I 2.7059
2 G I 1.0915
3 G I -0.3789
4 H I 0.0000
5 K I -1.1411
6 G I 0.0000
7 F I 2.9998
1 F J 2.6762
2 G J 0.9872
3 G J -0.2915
4 H J 0.0000
5 K J -0.9158
6 G J 0.0000
7 F J 3.0877
1 F K 2.9345
2 G K 1.1204
3 G K -0.2067
4 H K 0.0000
5 K K -0.8873
6 G K 0.0000
7 F K 3.0968
1 F L 3.4361
2 G L 1.3852
3 G L -0.5258
4 H L 0.0000
5 K L -1.3103
6 G L 0.0000
7 F L 2.5375
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Laboratory of Theory of Biopolymers 2018