Project name: test1

Status: done

Started: 2026-03-11 10:28:28
Settings
Chain sequence(s) A: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
C: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
B: VHLTPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARNFGKEFTPQMQAAYQKVVAGVANALAHKYH
D: VHLTPEEKTAVNALWGKVNVDAVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARNFGKEFTPQMQAAYQKVVAGVANALAHKYH
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:17:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:18:00)
Show buried residues

Minimal score value
-3.4339
Maximal score value
0.3743
Average score
-0.819
Total score value
-470.1077

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 0.1310
2 L A 0.0000
3 S A 0.0000
4 P A -0.6827
5 A A -0.6135
6 D A 0.0000
7 K A -0.9954
8 T A -0.7324
9 N A -0.7503
10 V A 0.0000
11 K A -1.5339
12 A A -1.2531
13 A A 0.0000
14 W A 0.0000
15 G A -1.6708
16 K A -2.0996
17 V A 0.0000
18 G A -1.2187
19 A A -1.0212
20 H A -1.9188
21 A A 0.0000
22 G A -2.6181
23 E A -2.5245
24 Y A 0.0000
25 G A 0.0000
26 A A 0.0000
27 E A -1.1867
28 A A 0.0000
29 L A 0.0000
30 E A -0.6913
31 R A 0.0000
32 M A 0.0000
33 F A 0.0000
34 L A 0.3743
35 S A 0.1690
36 F A 0.2825
37 P A -0.0926
38 T A -0.4118
39 T A 0.0000
40 K A -0.5079
41 T A -0.4273
42 Y A 0.0128
43 F A -0.3477
44 P A -0.8332
45 H A -1.3041
46 F A -1.2384
47 D A -2.1278
48 L A -1.3508
49 S A -1.1971
50 H A -1.5928
51 G A -1.5555
52 S A 0.0000
53 A A -1.2808
54 Q A -1.5169
55 V A 0.0000
56 K A -2.7169
57 G A -2.1584
58 H A -2.0068
59 G A 0.0000
60 K A -3.4339
61 K A -2.9327
62 V A -1.4250
63 A A 0.0000
64 D A -2.1929
65 A A -1.2319
66 L A 0.0000
67 T A -1.1908
68 N A -1.1186
69 A A 0.0000
70 V A 0.0000
71 A A -1.1726
72 H A -2.0562
73 V A -1.8369
74 D A -2.9212
75 D A -3.0996
76 M A 0.0000
77 P A -1.5038
78 N A -2.2954
79 A A -1.4757
80 L A 0.0000
81 S A -0.9695
82 A A -0.4089
83 L A -0.2056
84 S A 0.0000
85 D A -2.1153
86 L A -0.7552
87 H A -0.8410
88 A A 0.0000
89 H A -2.2421
90 K A -2.1871
91 L A -0.8311
92 R A -0.9024
93 V A -0.1362
94 D A 0.0000
95 P A -0.2253
96 V A -0.4327
97 N A -0.2362
98 F A -0.3729
99 K A -1.3361
100 L A -0.2730
101 L A -0.0014
102 S A -0.4143
103 H A 0.0000
104 C A 0.0000
105 L A 0.0000
106 L A 0.0000
107 V A 0.0000
108 T A 0.0000
109 L A 0.0000
110 A A 0.0000
111 A A 0.0000
112 H A -0.7902
113 L A -0.5417
114 P A -0.6095
115 A A -0.4134
116 E A -0.9497
117 F A 0.0000
118 T A -0.4644
119 P A -0.3669
120 A A -0.3746
121 V A -0.2771
122 H A 0.0000
123 A A -0.1276
124 S A 0.0000
125 L A 0.0000
126 D A -0.5561
127 K A -0.3448
128 F A 0.0000
129 L A 0.0000
130 A A -0.4379
131 S A 0.0149
132 V A 0.0000
133 S A 0.0000
134 T A 0.0352
135 V A 0.0000
136 L A 0.0000
137 T A -0.2423
138 S A 0.0000
139 K A -1.5744
140 Y A -1.3923
141 R A -2.2620
1 V B -0.9847
2 H B -1.4527
3 L B 0.0000
4 T B -1.2407
5 P B -1.5925
6 E B -2.4009
7 E B -1.9254
8 K B -1.9015
9 T B -1.4637
10 A B -1.2591
11 V B 0.0000
12 N B -1.6360
13 A B -1.0392
14 L B 0.0000
15 W B -0.9727
16 G B -1.4498
17 K B -2.0245
18 V B 0.0000
19 N B -1.6341
20 V B -0.4616
21 D B -1.9749
22 A B -1.1814
23 V B 0.0000
24 G B 0.0000
25 G B 0.0000
26 E B -0.7533
27 A B 0.0000
28 L B 0.0000
29 G B 0.0000
30 R B 0.0000
31 L B 0.0000
32 L B 0.0000
33 V B 0.0000
34 V B 0.0000
35 Y B 0.1594
36 P B -0.2390
37 W B -0.1436
38 T B 0.0000
39 Q B 0.0000
40 R B -0.8298
41 F B 0.1716
42 F B -0.8101
43 E B -2.1018
44 S B -1.3801
45 F B -1.4159
46 G B -1.9840
47 D B -2.3466
48 L B 0.0000
49 S B -1.2296
50 S B -1.0816
51 P B -1.0480
52 D B -1.9722
53 A B -1.6124
54 V B 0.0000
55 M B -1.1632
56 G B -1.4363
57 N B -1.7155
58 P B -1.4498
59 K B -1.9711
60 V B 0.0000
61 K B -2.6218
62 A B -2.1926
63 H B -1.9292
64 G B 0.0000
65 K B -2.4210
66 K B -2.4129
67 V B -1.0297
68 L B 0.0000
69 G B -1.2501
70 A B -1.1145
71 F B 0.0000
72 S B -1.1402
73 D B -1.8702
74 G B 0.0000
75 L B 0.0000
76 A B -1.4162
77 H B -2.1603
78 L B 0.0000
79 D B -2.9618
80 N B -2.8123
81 L B 0.0000
82 K B -2.0239
83 G B -1.7362
84 T B -1.6124
85 F B 0.0000
86 S B -1.5794
87 Q B -1.6184
88 L B -1.0295
89 S B 0.0000
90 E B -2.4572
91 L B -1.3781
92 H B -1.3374
93 C B 0.0000
94 D B -2.9769
95 K B -2.4222
96 L B -0.7893
97 H B -1.2743
98 V B 0.0000
99 D B -0.8740
100 P B -1.2200
101 E B -1.8796
102 N B 0.0000
103 F B 0.0000
104 R B -2.2280
105 L B -0.9927
106 L B -0.4636
107 G B 0.0000
108 N B -0.6227
109 V B 0.0000
110 L B 0.0000
111 V B 0.0000
112 C B 0.0000
113 V B 0.0000
114 L B 0.0000
115 A B 0.0000
116 R B -1.1478
117 N B -1.4979
118 F B -1.4115
119 G B -1.6578
120 K B -2.5569
121 E B -2.4221
122 F B 0.0000
123 T B -1.2732
124 P B -0.9074
125 Q B -1.0545
126 M B -0.7762
127 Q B 0.0000
128 A B 0.0000
129 A B 0.0000
130 Y B 0.0000
131 Q B 0.0000
132 K B -0.8743
133 V B 0.0000
134 V B 0.0000
135 A B -0.8086
136 G B -1.0240
137 V B 0.0000
138 A B 0.0000
139 N B -1.0264
140 A B 0.0000
141 L B -0.8468
142 A B 0.0000
143 H B -1.4286
144 K B -2.1179
145 Y B -0.8614
146 H B -0.7715
1 V C 0.1353
2 L C 0.0000
3 S C 0.0000
4 P C -0.7446
5 A C -0.5700
6 D C 0.0000
7 K C -1.0170
8 T C -0.6927
9 N C -0.7468
10 V C 0.0000
11 K C -1.4992
12 A C -1.2962
13 A C 0.0000
14 W C 0.0000
15 G C -1.7902
16 K C -2.3449
17 V C 0.0000
18 G C -1.3085
19 A C -1.0850
20 H C -1.7207
21 A C 0.0000
22 G C -2.1384
23 E C -1.8826
24 Y C 0.0000
25 G C 0.0000
26 A C 0.0000
27 E C -0.9822
28 A C 0.0000
29 L C 0.0000
30 E C -1.0488
31 R C 0.0000
32 M C 0.0000
33 F C 0.0000
34 L C -0.0285
35 S C -0.0603
36 F C 0.1323
37 P C -0.1544
38 T C -0.4513
39 T C 0.0000
40 K C -0.5131
41 T C -0.3841
42 Y C 0.0653
43 F C -0.2842
44 P C -0.7842
45 H C -1.2796
46 F C -1.0784
47 D C -2.1441
48 L C -1.3688
49 S C -1.1212
50 H C -1.6606
51 G C -1.7439
52 S C -1.5733
53 A C -1.2386
54 Q C -1.7853
55 V C 0.0000
56 K C -2.6115
57 G C -2.0356
58 H C -1.9654
59 G C 0.0000
60 K C -2.9437
61 K C -2.6819
62 V C -1.4448
63 A C 0.0000
64 D C -1.8954
65 A C -1.1769
66 L C 0.0000
67 T C -1.2785
68 N C -1.3899
69 A C 0.0000
70 V C 0.0000
71 A C -1.3800
72 H C -2.2169
73 V C -1.9051
74 D C -2.8458
75 D C -3.1074
76 M C 0.0000
77 P C -1.5990
78 N C -2.0608
79 A C -1.5929
80 L C 0.0000
81 S C -0.8269
82 A C -0.1686
83 L C -0.0813
84 S C 0.0000
85 D C -1.2648
86 L C -0.4540
87 H C -0.6063
88 A C 0.0000
89 H C -1.9395
90 K C -1.9509
91 L C -0.7469
92 R C -0.7809
93 V C -0.1372
94 D C 0.0000
95 P C -0.3325
96 V C -0.4070
97 N C -0.2290
98 F C -0.3843
99 K C -1.3531
100 L C -0.3264
101 L C -0.0495
102 S C -0.4065
103 H C 0.0000
104 C C 0.0000
105 L C 0.0000
106 L C 0.0000
107 V C 0.0000
108 T C 0.0000
109 L C 0.0000
110 A C 0.0000
111 A C -1.1200
112 H C -0.8639
113 L C -0.5271
114 P C -0.5436
115 A C -0.3463
116 E C -0.8954
117 F C 0.0000
118 T C -0.2227
119 P C -0.2674
120 A C -0.2694
121 V C -0.1957
122 H C 0.0000
123 A C -0.0875
124 S C 0.0000
125 L C 0.0000
126 D C -0.5797
127 K C -0.3654
128 F C 0.0000
129 L C 0.0000
130 A C -0.4182
131 S C 0.0314
132 V C 0.0000
133 S C -0.3118
134 T C -0.0198
135 V C 0.0000
136 L C 0.0000
137 T C -0.1212
138 S C 0.0000
139 K C -1.3090
140 Y C -1.2557
141 R C -2.1130
1 V D -0.6046
2 H D -1.2165
3 L D 0.0000
4 T D -1.3156
5 P D -1.6615
6 E D -2.3663
7 E D -2.1364
8 K D -2.1111
9 T D -1.6156
10 A D -1.3704
11 V D 0.0000
12 N D -1.7768
13 A D -1.1801
14 L D 0.0000
15 W D -1.1571
16 G D -1.6379
17 K D -2.1706
18 V D -1.6407
19 N D -2.1364
20 V D -1.8058
21 D D -2.6233
22 A D -1.4926
23 V D 0.0000
24 G D 0.0000
25 G D 0.0000
26 E D -0.7313
27 A D 0.0000
28 L D 0.0000
29 G D 0.0000
30 R D 0.0000
31 L D 0.0000
32 L D 0.0000
33 V D 0.0210
34 V D 0.0000
35 Y D 0.1878
36 P D -0.1960
37 W D -0.1409
38 T D 0.0000
39 Q D 0.0000
40 R D -0.7896
41 F D 0.1012
42 F D -0.8511
43 E D -2.0858
44 S D -1.3951
45 F D -1.4170
46 G D -1.9973
47 D D -2.7254
48 L D 0.0000
49 S D -1.2430
50 S D -1.0908
51 P D -1.0328
52 D D -2.1279
53 A D -1.6245
54 V D 0.0000
55 M D -1.0716
56 G D -1.5717
57 N D 0.0000
58 P D -1.6184
59 K D -2.2060
60 V D 0.0000
61 K D -2.5434
62 A D -2.1056
63 H D -2.1165
64 G D 0.0000
65 K D -2.6844
66 K D -2.4668
67 V D -1.0503
68 L D 0.0000
69 G D -1.3255
70 A D -0.9884
71 F D 0.0000
72 S D -1.1143
73 D D -1.4763
74 G D 0.0000
75 L D 0.0000
76 A D -1.2041
77 H D -1.8790
78 L D -1.7055
79 D D -2.6724
80 N D -2.5820
81 L D 0.0000
82 K D -1.7686
83 G D -1.7774
84 T D -1.5532
85 F D 0.0000
86 S D -1.3739
87 Q D -1.7482
88 L D -0.8045
89 S D 0.0000
90 E D -2.7900
91 L D -1.6302
92 H D -1.2818
93 C D -1.6682
94 D D -2.9227
95 K D -2.5281
96 L D -0.7733
97 H D -1.2137
98 V D -0.5688
99 D D -0.7326
100 P D -1.1704
101 E D -1.5615
102 N D 0.0000
103 F D 0.0000
104 R D -1.2243
105 L D -0.5342
106 L D -0.1903
107 G D 0.0000
108 N D -0.3888
109 V D 0.0000
110 L D 0.0000
111 V D 0.0000
112 C D 0.0000
113 V D 0.0000
114 L D 0.0000
115 A D 0.0000
116 R D -1.1644
117 N D -1.3170
118 F D -1.4354
119 G D -1.7614
120 K D -2.7514
121 E D -2.8124
122 F D 0.0000
123 T D -1.4545
124 P D 0.0000
125 Q D -1.3177
126 M D -0.9188
127 Q D 0.0000
128 A D 0.0000
129 A D 0.0000
130 Y D 0.0000
131 Q D 0.0000
132 K D -0.7987
133 V D 0.0000
134 V D 0.0000
135 A D -0.4405
136 G D -0.5642
137 V D 0.0000
138 A D 0.0000
139 N D -0.6953
140 A D 0.0000
141 L D -0.7310
142 A D 0.0000
143 H D -0.8953
144 K D -0.9432
145 Y D 0.1326
146 H D -1.0089
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Laboratory of Theory of Biopolymers 2018