| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDISNTSHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPKIGLPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.4939 | |
| 2 | S | A | 0.4164 | |
| 3 | D | A | 0.1363 | |
| 4 | V | A | 0.2266 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.7220 | |
| 7 | D | A | -3.1818 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0887 | |
| 10 | V | A | 0.0840 | |
| 11 | V | A | 1.5318 | |
| 12 | A | A | 0.8918 | |
| 13 | A | A | 0.3010 | |
| 14 | T | A | -0.5361 | |
| 15 | P | A | -1.1458 | |
| 16 | T | A | -1.0064 | |
| 17 | S | A | -0.5361 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7367 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.0263 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.8671 | |
| 24 | I | A | -1.3781 | |
| 25 | S | A | 0.0000 | |
| 26 | N | A | -1.3628 | |
| 27 | T | A | -0.7582 | |
| 28 | S | A | -0.8842 | |
| 29 | H | A | -1.3688 | |
| 30 | G | A | -0.5614 | |
| 31 | Y | A | 0.1050 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.6242 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | -0.4307 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5800 | |
| 39 | T | A | -1.2443 | |
| 40 | G | A | -1.2433 | |
| 41 | G | A | -1.3700 | |
| 42 | N | A | -1.5346 | |
| 43 | S | A | -0.8797 | |
| 44 | P | A | -0.4081 | |
| 45 | V | A | 0.2704 | |
| 46 | Q | A | -1.1978 | |
| 47 | E | A | -1.8709 | |
| 48 | F | A | -0.8316 | |
| 49 | T | A | -0.2530 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.7046 | |
| 52 | G | A | -0.7841 | |
| 53 | S | A | -1.1536 | |
| 54 | K | A | -1.7547 | |
| 55 | S | A | -1.1190 | |
| 56 | T | A | -0.6527 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2342 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6594 | |
| 61 | G | A | -1.0316 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3834 | |
| 64 | P | A | -1.6800 | |
| 65 | G | A | -1.4595 | |
| 66 | V | A | -1.4700 | |
| 67 | D | A | -2.1216 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7702 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1693 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.8499 | |
| 74 | A | A | 0.7855 | |
| 75 | V | A | 0.1198 | |
| 76 | T | A | -0.7466 | |
| 77 | T | A | -1.3577 | |
| 78 | R | A | -2.3259 | |
| 79 | P | A | -1.3615 | |
| 80 | K | A | -1.2859 | |
| 81 | I | A | 1.2672 | |
| 82 | G | A | 0.9731 | |
| 83 | L | A | 1.8811 | |
| 84 | P | A | 1.0455 | |
| 85 | I | A | 0.2805 | |
| 86 | S | A | -0.2822 | |
| 87 | I | A | -0.6940 | |
| 88 | N | A | -1.7094 | |
| 89 | Y | A | -1.4502 | |
| 90 | R | A | -2.5391 | |
| 91 | T | A | -1.5261 |