Project name: query_structure

Status: done

Started: 2026-03-17 01:16:30
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDISNTSHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPKIGLPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-3.1818
Maximal score value
1.8811
Average score
-0.5984
Total score value
-54.4536

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.4939
2 S A 0.4164
3 D A 0.1363
4 V A 0.2266
5 P A 0.0000
6 R A -2.7220
7 D A -3.1818
8 L A 0.0000
9 E A -2.0887
10 V A 0.0840
11 V A 1.5318
12 A A 0.8918
13 A A 0.3010
14 T A -0.5361
15 P A -1.1458
16 T A -1.0064
17 S A -0.5361
18 L A 0.0000
19 L A 0.7367
20 I A 0.0000
21 S A -1.0263
22 W A 0.0000
23 D A -2.8671
24 I A -1.3781
25 S A 0.0000
26 N A -1.3628
27 T A -0.7582
28 S A -0.8842
29 H A -1.3688
30 G A -0.5614
31 Y A 0.1050
32 Y A 0.0000
33 R A -0.6242
34 I A 0.0000
35 T A 0.0000
36 Y A -0.4307
37 G A 0.0000
38 E A -1.5800
39 T A -1.2443
40 G A -1.2433
41 G A -1.3700
42 N A -1.5346
43 S A -0.8797
44 P A -0.4081
45 V A 0.2704
46 Q A -1.1978
47 E A -1.8709
48 F A -0.8316
49 T A -0.2530
50 V A 0.0000
51 P A -0.7046
52 G A -0.7841
53 S A -1.1536
54 K A -1.7547
55 S A -1.1190
56 T A -0.6527
57 A A 0.0000
58 T A 0.2342
59 I A 0.0000
60 S A -0.6594
61 G A -1.0316
62 L A 0.0000
63 K A -2.3834
64 P A -1.6800
65 G A -1.4595
66 V A -1.4700
67 D A -2.1216
68 Y A 0.0000
69 T A -0.7702
70 I A 0.0000
71 T A -0.1693
72 V A 0.0000
73 Y A 0.8499
74 A A 0.7855
75 V A 0.1198
76 T A -0.7466
77 T A -1.3577
78 R A -2.3259
79 P A -1.3615
80 K A -1.2859
81 I A 1.2672
82 G A 0.9731
83 L A 1.8811
84 P A 1.0455
85 I A 0.2805
86 S A -0.2822
87 I A -0.6940
88 N A -1.7094
89 Y A -1.4502
90 R A -2.5391
91 T A -1.5261
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Laboratory of Theory of Biopolymers 2018