| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYLITYGETGGNSPVQEFTVPGSKSTATISGLSPGVDYTITVYAGDWAYGWEYYYYNSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7949 | |
| 2 | S | A | 0.6644 | |
| 3 | S | A | 0.3148 | |
| 4 | V | A | 0.0280 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6908 | |
| 7 | K | A | -2.6632 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9323 | |
| 10 | V | A | 0.0931 | |
| 11 | V | A | 1.5302 | |
| 12 | A | A | 0.8907 | |
| 13 | A | A | 0.2904 | |
| 14 | T | A | -0.1931 | |
| 15 | P | A | -0.8170 | |
| 16 | T | A | -0.5440 | |
| 17 | S | A | -0.3117 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7413 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9728 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6986 | |
| 24 | A | A | -1.2309 | |
| 25 | P | A | -0.0123 | |
| 26 | A | A | 0.4219 | |
| 27 | V | A | 0.6139 | |
| 28 | T | A | -0.1435 | |
| 29 | V | A | -0.4503 | |
| 30 | D | A | -0.8208 | |
| 31 | H | A | 0.0000 | |
| 32 | Y | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4304 | |
| 36 | Y | A | -0.2831 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4523 | |
| 39 | T | A | -1.3213 | |
| 40 | G | A | -1.3729 | |
| 41 | G | A | -1.2624 | |
| 42 | N | A | -1.6887 | |
| 43 | S | A | -0.8405 | |
| 44 | P | A | -0.2777 | |
| 45 | V | A | 0.4758 | |
| 46 | Q | A | -0.8031 | |
| 47 | E | A | -1.5261 | |
| 48 | F | A | -0.5419 | |
| 49 | T | A | -0.2103 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.9156 | |
| 52 | G | A | -1.1371 | |
| 53 | S | A | -1.1634 | |
| 54 | K | A | -2.0053 | |
| 55 | S | A | -1.4037 | |
| 56 | T | A | -0.7480 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2344 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4706 | |
| 61 | G | A | -0.6821 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8509 | |
| 64 | P | A | -1.0262 | |
| 65 | G | A | -1.1426 | |
| 66 | V | A | -1.0399 | |
| 67 | D | A | -1.8187 | |
| 68 | Y | A | -1.0779 | |
| 69 | T | A | -0.7450 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0893 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.2499 | |
| 74 | A | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | D | A | 0.0644 | |
| 77 | W | A | 1.6650 | |
| 78 | A | A | 1.6311 | |
| 79 | Y | A | 1.5986 | |
| 80 | G | A | 0.7088 | |
| 81 | W | A | 1.0898 | |
| 82 | E | A | -0.3319 | |
| 83 | Y | A | 1.9911 | |
| 84 | Y | A | 2.4347 | |
| 85 | Y | A | 2.1684 | |
| 86 | Y | A | 1.1785 | |
| 87 | N | A | -0.1166 | |
| 88 | S | A | -0.1959 | |
| 89 | P | A | -0.0917 | |
| 90 | I | A | -0.0259 | |
| 91 | S | A | -0.5416 | |
| 92 | I | A | -0.7034 | |
| 93 | N | A | -1.7043 | |
| 94 | Y | A | -1.4727 | |
| 95 | R | A | -2.3637 | |
| 96 | T | A | -1.2110 |