| Chain sequence(s) |
I: VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIPEEYLQ
H: IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDRLGS L: TFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR input PDB |
| Selected Chain(s) | I,H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:14:32)
[INFO] Main: Simulation completed successfully. (00:14:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1H | T | L | -0.4837 | |
| 1G | F | L | 0.0174 | |
| 1F | G | L | -0.8346 | |
| 1E | A | L | 0.0000 | |
| 1D | G | L | -1.2691 | |
| 1C | E | L | -1.5712 | |
| 1B | A | L | -1.0033 | |
| 1A | D | L | -1.2227 | |
| 1 | C | L | -0.8284 | |
| 2 | G | L | 0.0000 | |
| 3 | L | L | -0.7769 | |
| 4 | R | L | 0.0000 | |
| 5 | P | L | -1.3016 | |
| 6 | L | L | -0.9922 | |
| 7 | F | L | -1.1075 | |
| 8 | E | L | 0.0000 | |
| 9 | K | L | -2.7968 | |
| 10 | K | L | -2.7047 | |
| 11 | Q | L | -2.1532 | |
| 12 | V | L | -0.8260 | |
| 13 | Q | L | -1.7253 | |
| 14 | D | L | 0.0000 | |
| 14A | Q | L | -1.9657 | |
| 14B | T | L | -1.3641 | |
| 14C | E | L | 0.0000 | |
| 14D | K | L | -2.6491 | |
| 14E | E | L | -1.8878 | |
| 14F | L | L | 0.0000 | |
| 14G | F | L | -0.9610 | |
| 14H | E | L | -1.9614 | |
| 14I | S | L | -1.3755 | |
| 14J | Y | L | -0.4799 | |
| 14K | I | L | 0.3380 | |
| 14L | E | L | -1.6800 | |
| 14M | G | L | -1.5341 | |
| 15 | R | L | -2.0658 | |
| 16 | I | H | 0.0000 | |
| 17 | V | H | 0.0000 | |
| 18 | E | H | -3.0983 | |
| 19 | G | H | -2.3140 | |
| 20 | Q | H | -2.8372 | |
| 21 | D | H | -2.9116 | |
| 22 | A | H | 0.0000 | |
| 23 | E | H | -2.2621 | |
| 24 | V | H | -0.5221 | |
| 25 | G | H | -0.3536 | |
| 26 | L | H | 0.0000 | |
| 27 | S | H | -0.2846 | |
| 28 | P | H | 0.0000 | |
| 29 | W | H | 0.0000 | |
| 30 | Q | H | 0.0000 | |
| 31 | V | H | 0.0000 | |
| 32 | M | H | 0.0000 | |
| 33 | L | H | 0.0000 | |
| 34 | F | H | 0.0000 | |
| 35 | R | H | -1.2491 | |
| 36 | K | H | -1.2707 | |
| 36A | S | H | -1.1839 | |
| 37 | P | H | -1.3047 | |
| 38 | Q | H | -2.4274 | |
| 39 | E | H | -1.8953 | |
| 40 | L | H | 0.0000 | |
| 41 | L | H | -0.5656 | |
| 42 | C | H | 0.0000 | |
| 43 | G | H | 0.0000 | |
| 44 | A | H | 0.0000 | |
| 45 | S | H | 0.0000 | |
| 46 | L | H | 0.0000 | |
| 47 | I | H | 0.0000 | |
| 48 | S | H | 0.0000 | |
| 49 | D | H | -1.1838 | |
| 50 | R | H | -1.4400 | |
| 51 | W | H | 0.0000 | |
| 52 | V | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | T | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | A | H | 0.0000 | |
| 57 | H | H | 0.0000 | |
| 58 | C | H | 0.0000 | |
| 59 | L | H | 0.0000 | |
| 60 | L | H | -0.3994 | |
| 60A | Y | H | 0.0000 | |
| 60B | P | H | -1.0842 | |
| 60C | P | H | -1.0633 | |
| 60D | W | H | -1.0614 | |
| 60E | D | H | -2.0513 | |
| 60F | K | H | 0.0000 | |
| 60G | N | H | -1.4863 | |
| 60H | F | H | -0.7880 | |
| 60I | T | H | -0.8592 | |
| 61 | V | H | -0.9197 | |
| 62 | D | H | -1.8360 | |
| 63 | D | H | -1.4081 | |
| 64 | L | H | 0.0000 | |
| 65 | L | H | 0.0000 | |
| 66 | V | H | 0.0000 | |
| 67 | R | H | 0.0000 | |
| 68 | I | H | 0.0000 | |
| 69 | G | H | 0.0000 | |
| 70 | K | H | 0.0000 | |
| 71 | H | H | -0.7325 | |
| 72 | S | H | -0.7754 | |
| 73 | R | H | 0.0000 | |
| 74 | T | H | -2.0073 | |
| 75 | R | H | -2.8012 | |
| 76 | Y | H | -2.2441 | |
| 77 | E | H | -2.2050 | |
| 77A | R | H | -3.0094 | |
| 78 | K | H | -2.6298 | |
| 79 | V | H | -1.4813 | |
| 80 | E | H | 0.0000 | |
| 81 | K | H | -1.3756 | |
| 82 | I | H | 0.0000 | |
| 83 | S | H | 0.0000 | |
| 84 | M | H | -0.6003 | |
| 85 | L | H | 0.0000 | |
| 86 | D | H | -1.6557 | |
| 87 | K | H | -1.1108 | |
| 88 | I | H | 0.2058 | |
| 89 | Y | H | 0.4891 | |
| 90 | I | H | 0.2218 | |
| 91 | H | H | -0.7071 | |
| 92 | P | H | -1.1109 | |
| 93 | R | H | -2.1028 | |
| 94 | Y | H | 0.0000 | |
| 95 | N | H | -1.8980 | |
| 96 | W | H | -1.5617 | |
| 97 | K | H | -2.7508 | |
| 97A | E | H | -3.0546 | |
| 98 | N | H | 0.0000 | |
| 99 | L | H | 0.0000 | |
| 100 | D | H | 0.0000 | |
| 101 | R | H | -1.3874 | |
| 102 | D | H | 0.0000 | |
| 103 | I | H | 0.0000 | |
| 104 | A | H | 0.0000 | |
| 105 | L | H | 0.0000 | |
| 106 | L | H | 0.0000 | |
| 107 | K | H | -1.0694 | |
| 108 | L | H | 0.0000 | |
| 109 | K | H | -2.1531 | |
| 110 | R | H | -1.8614 | |
| 111 | P | H | -1.4489 | |
| 112 | I | H | 0.0000 | |
| 113 | E | H | -1.9028 | |
| 114 | L | H | -0.6919 | |
| 115 | S | H | -0.7392 | |
| 116 | D | H | -0.9724 | |
| 117 | Y | H | -0.1252 | |
| 118 | I | H | 0.0000 | |
| 119 | H | H | 0.0000 | |
| 120 | P | H | 0.0000 | |
| 121 | V | H | 0.0000 | |
| 122 | C | H | 0.0000 | |
| 123 | L | H | -0.3270 | |
| 124 | P | H | 0.0000 | |
| 125 | D | H | -2.3997 | |
| 126 | K | H | -2.8985 | |
| 127 | Q | H | -2.5826 | |
| 128 | T | H | 0.0000 | |
| 129 | A | H | 0.0000 | |
| 129A | A | H | -1.4328 | |
| 129B | K | H | -1.6363 | |
| 129C | L | H | 0.0000 | |
| 130 | L | H | -0.2466 | |
| 131 | H | H | -1.0462 | |
| 132 | A | H | -0.9371 | |
| 133 | G | H | -1.1230 | |
| 134 | F | H | 0.0000 | |
| 135 | K | H | -0.4862 | |
| 136 | G | H | 0.0000 | |
| 137 | R | H | 0.0000 | |
| 138 | V | H | 0.0000 | |
| 139 | T | H | 0.0000 | |
| 140 | G | H | 0.0000 | |
| 141 | W | H | 0.0000 | |
| 142 | G | H | 0.0000 | |
| 143 | N | H | 0.0000 | |
| 144 | R | H | -2.2688 | |
| 145 | R | H | -1.9613 | |
| 146 | E | H | -1.0675 | |
| 147 | T | H | -0.4914 | |
| 148 | W | H | -0.0493 | |
| 149 | T | H | 0.0457 | |
| 149A | T | H | 0.1324 | |
| 149B | S | H | -0.0415 | |
| 149C | V | H | 0.8025 | |
| 149D | A | H | -0.5490 | |
| 149E | E | H | -1.7859 | |
| 150 | V | H | 0.0000 | |
| 151 | Q | H | -1.8452 | |
| 152 | P | H | 0.0000 | |
| 153 | S | H | -0.8046 | |
| 154 | V | H | -0.9478 | |
| 155 | L | H | 0.0000 | |
| 156 | Q | H | 0.0000 | |
| 157 | V | H | 0.0000 | |
| 158 | V | H | 0.0000 | |
| 159 | N | H | 0.0000 | |
| 160 | L | H | 0.0000 | |
| 161 | P | H | 0.0000 | |
| 162 | L | H | 0.0000 | |
| 163 | V | H | 0.0000 | |
| 164 | E | H | -1.1502 | |
| 165 | R | H | -1.4855 | |
| 166 | P | H | -1.0005 | |
| 167 | V | H | -0.5927 | |
| 168 | C | H | 0.0000 | |
| 169 | K | H | -2.3989 | |
| 170 | A | H | -1.0350 | |
| 171 | S | H | -1.0620 | |
| 172 | T | H | -1.6567 | |
| 173 | R | H | -2.5642 | |
| 174 | I | H | -2.1665 | |
| 175 | R | H | -2.7096 | |
| 176 | I | H | -1.8399 | |
| 177 | T | H | -1.3317 | |
| 178 | D | H | -1.7279 | |
| 179 | N | H | 0.0000 | |
| 180 | M | H | 0.0000 | |
| 181 | F | H | -0.2874 | |
| 182 | C | H | 0.0000 | |
| 183 | A | H | 0.0000 | |
| 184 | G | H | 0.0000 | |
| 184A | Y | H | -1.9937 | |
| 185 | K | H | -2.2450 | |
| 186 | P | H | -2.4457 | |
| 186A | G | H | -2.4914 | |
| 186B | E | H | -3.2382 | |
| 186C | G | H | -2.7099 | |
| 186D | K | H | -3.3982 | |
| 187 | R | H | -3.2107 | |
| 188 | G | H | 0.0000 | |
| 189 | D | H | 0.0000 | |
| 190 | A | H | 0.0000 | |
| 191 | C | H | 0.0000 | |
| 192 | E | H | -0.7026 | |
| 193 | G | H | 0.0000 | |
| 194 | D | H | 0.0000 | |
| 195 | S | H | -0.0068 | |
| 196 | G | H | 0.0000 | |
| 197 | G | H | 0.0000 | |
| 198 | P | H | 0.0000 | |
| 199 | F | H | 0.0000 | |
| 200 | V | H | 0.0000 | |
| 201 | M | H | 0.0000 | |
| 202 | K | H | 0.0000 | |
| 203 | S | H | 0.0000 | |
| 204 | P | H | 0.1085 | |
| 204A | Y | H | 0.4407 | |
| 204B | N | H | -0.3635 | |
| 205 | N | H | -0.9423 | |
| 206 | R | H | -0.6865 | |
| 207 | W | H | 0.0000 | |
| 208 | Y | H | 0.0000 | |
| 209 | Q | H | 0.0000 | |
| 210 | M | H | 0.0000 | |
| 211 | G | H | 0.0000 | |
| 212 | I | H | 0.0000 | |
| 213 | V | H | 0.0000 | |
| 214 | S | H | 0.0000 | |
| 215 | W | H | 0.0000 | |
| 216 | G | H | 0.0000 | |
| 217 | E | H | 0.0000 | |
| 219 | G | H | 0.0000 | |
| 220 | C | H | 0.0000 | |
| 221 | D | H | 0.0000 | |
| 221A | R | H | -1.5658 | |
| 222 | D | H | -2.4412 | |
| 223 | G | H | -1.4687 | |
| 224 | K | H | 0.0000 | |
| 225 | Y | H | 0.0000 | |
| 226 | G | H | 0.0000 | |
| 227 | F | H | 0.0000 | |
| 228 | Y | H | 0.0000 | |
| 229 | T | H | 0.0000 | |
| 230 | H | H | -0.6999 | |
| 231 | V | H | 0.0000 | |
| 232 | F | H | -1.0443 | |
| 233 | R | H | -1.7596 | |
| 234 | L | H | 0.0000 | |
| 235 | K | H | -2.1887 | |
| 236 | K | H | -2.9245 | |
| 237 | W | H | 0.0000 | |
| 238 | I | H | 0.0000 | |
| 239 | Q | H | -3.2152 | |
| 240 | K | H | -3.1290 | |
| 241 | V | H | 0.0000 | |
| 242 | I | H | 0.0000 | |
| 243 | D | H | -1.4698 | |
| 244 | R | H | -1.8606 | |
| 245 | L | H | 0.3030 | |
| 246 | G | H | -0.7721 | |
| 247 | S | H | -0.9191 | |
| 1 | V | I | 0.0000 | |
| 2 | V | I | 0.1357 | |
| 3 | Y | I | 0.0000 | |
| 4 | T | I | 0.0000 | |
| 5 | D | I | -1.2680 | |
| 6 | C | I | 0.0000 | |
| 7 | T | I | -1.0342 | |
| 8 | E | I | -1.9266 | |
| 9 | S | I | -1.0236 | |
| 10 | G | I | -0.9765 | |
| 11 | Q | I | 0.0000 | |
| 12 | N | I | 0.0000 | |
| 13 | L | I | -0.5364 | |
| 14 | C | I | 0.0000 | |
| 15 | L | I | 0.0000 | |
| 16 | C | I | 0.0000 | |
| 17 | E | I | -2.7376 | |
| 18 | G | I | -1.9894 | |
| 19 | S | I | -1.3498 | |
| 20 | N | I | -1.5798 | |
| 21 | V | I | 0.0000 | |
| 22 | C | I | 0.0000 | |
| 23 | G | I | -1.6713 | |
| 24 | Q | I | -2.2830 | |
| 25 | G | I | -1.7190 | |
| 26 | N | I | -1.4489 | |
| 27 | K | I | -1.3677 | |
| 28 | C | I | 0.0000 | |
| 29 | I | I | -0.5591 | |
| 30 | L | I | -1.3476 | |
| 31 | G | I | -2.1727 | |
| 32 | S | I | -2.0739 | |
| 33 | D | I | -2.9304 | |
| 34 | G | I | -2.7741 | |
| 35 | E | I | -3.7528 | |
| 36 | K | I | -3.7561 | |
| 37 | N | I | -2.6456 | |
| 38 | Q | I | -2.0158 | |
| 39 | C | I | -1.0195 | |
| 40 | V | I | -0.3666 | |
| 41 | T | I | -0.7412 | |
| 42 | G | I | -1.3815 | |
| 43 | E | I | -2.4544 | |
| 44 | G | I | -1.5271 | |
| 45 | T | I | -1.1339 | |
| 46 | P | I | -0.8854 | |
| 47 | K | I | -0.7365 | |
| 48 | P | I | -0.7491 | |
| 49 | Q | I | -0.9131 | |
| 50 | S | I | -1.0389 | |
| 51 | H | I | -1.4560 | |
| 52 | N | I | -1.2810 | |
| 53 | D | I | -1.7304 | |
| 54 | G | I | -2.1149 | |
| 55 | D | I | -2.9640 | |
| 56 | F | I | -2.5720 | |
| 57 | E | I | -2.8747 | |
| 58 | E | I | -3.1072 | |
| 59 | I | I | 0.0000 | |
| 60 | P | I | -2.0802 | |
| 61 | E | I | -3.1285 | |
| 62 | E | I | -2.7816 | |
| 63 | Y | I | -1.4437 | |
| 64 | L | I | -2.0165 | |
| 65 | Q | I | -2.0739 |