Project name: query_structure

Status: done

Started: 2026-03-17 01:32:44
Settings
Chain sequence(s) I: VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIPEEYLQ
H: IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDRLGS
L: TFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR
input PDB
Selected Chain(s) I,H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:14:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:14:36)
Show buried residues

Minimal score value
-3.7561
Maximal score value
0.8025
Average score
-0.8774
Total score value
-315.8496

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1H T L -0.4837
1G F L 0.0174
1F G L -0.8346
1E A L 0.0000
1D G L -1.2691
1C E L -1.5712
1B A L -1.0033
1A D L -1.2227
1 C L -0.8284
2 G L 0.0000
3 L L -0.7769
4 R L 0.0000
5 P L -1.3016
6 L L -0.9922
7 F L -1.1075
8 E L 0.0000
9 K L -2.7968
10 K L -2.7047
11 Q L -2.1532
12 V L -0.8260
13 Q L -1.7253
14 D L 0.0000
14A Q L -1.9657
14B T L -1.3641
14C E L 0.0000
14D K L -2.6491
14E E L -1.8878
14F L L 0.0000
14G F L -0.9610
14H E L -1.9614
14I S L -1.3755
14J Y L -0.4799
14K I L 0.3380
14L E L -1.6800
14M G L -1.5341
15 R L -2.0658
16 I H 0.0000
17 V H 0.0000
18 E H -3.0983
19 G H -2.3140
20 Q H -2.8372
21 D H -2.9116
22 A H 0.0000
23 E H -2.2621
24 V H -0.5221
25 G H -0.3536
26 L H 0.0000
27 S H -0.2846
28 P H 0.0000
29 W H 0.0000
30 Q H 0.0000
31 V H 0.0000
32 M H 0.0000
33 L H 0.0000
34 F H 0.0000
35 R H -1.2491
36 K H -1.2707
36A S H -1.1839
37 P H -1.3047
38 Q H -2.4274
39 E H -1.8953
40 L H 0.0000
41 L H -0.5656
42 C H 0.0000
43 G H 0.0000
44 A H 0.0000
45 S H 0.0000
46 L H 0.0000
47 I H 0.0000
48 S H 0.0000
49 D H -1.1838
50 R H -1.4400
51 W H 0.0000
52 V H 0.0000
53 L H 0.0000
54 T H 0.0000
55 A H 0.0000
56 A H 0.0000
57 H H 0.0000
58 C H 0.0000
59 L H 0.0000
60 L H -0.3994
60A Y H 0.0000
60B P H -1.0842
60C P H -1.0633
60D W H -1.0614
60E D H -2.0513
60F K H 0.0000
60G N H -1.4863
60H F H -0.7880
60I T H -0.8592
61 V H -0.9197
62 D H -1.8360
63 D H -1.4081
64 L H 0.0000
65 L H 0.0000
66 V H 0.0000
67 R H 0.0000
68 I H 0.0000
69 G H 0.0000
70 K H 0.0000
71 H H -0.7325
72 S H -0.7754
73 R H 0.0000
74 T H -2.0073
75 R H -2.8012
76 Y H -2.2441
77 E H -2.2050
77A R H -3.0094
78 K H -2.6298
79 V H -1.4813
80 E H 0.0000
81 K H -1.3756
82 I H 0.0000
83 S H 0.0000
84 M H -0.6003
85 L H 0.0000
86 D H -1.6557
87 K H -1.1108
88 I H 0.2058
89 Y H 0.4891
90 I H 0.2218
91 H H -0.7071
92 P H -1.1109
93 R H -2.1028
94 Y H 0.0000
95 N H -1.8980
96 W H -1.5617
97 K H -2.7508
97A E H -3.0546
98 N H 0.0000
99 L H 0.0000
100 D H 0.0000
101 R H -1.3874
102 D H 0.0000
103 I H 0.0000
104 A H 0.0000
105 L H 0.0000
106 L H 0.0000
107 K H -1.0694
108 L H 0.0000
109 K H -2.1531
110 R H -1.8614
111 P H -1.4489
112 I H 0.0000
113 E H -1.9028
114 L H -0.6919
115 S H -0.7392
116 D H -0.9724
117 Y H -0.1252
118 I H 0.0000
119 H H 0.0000
120 P H 0.0000
121 V H 0.0000
122 C H 0.0000
123 L H -0.3270
124 P H 0.0000
125 D H -2.3997
126 K H -2.8985
127 Q H -2.5826
128 T H 0.0000
129 A H 0.0000
129A A H -1.4328
129B K H -1.6363
129C L H 0.0000
130 L H -0.2466
131 H H -1.0462
132 A H -0.9371
133 G H -1.1230
134 F H 0.0000
135 K H -0.4862
136 G H 0.0000
137 R H 0.0000
138 V H 0.0000
139 T H 0.0000
140 G H 0.0000
141 W H 0.0000
142 G H 0.0000
143 N H 0.0000
144 R H -2.2688
145 R H -1.9613
146 E H -1.0675
147 T H -0.4914
148 W H -0.0493
149 T H 0.0457
149A T H 0.1324
149B S H -0.0415
149C V H 0.8025
149D A H -0.5490
149E E H -1.7859
150 V H 0.0000
151 Q H -1.8452
152 P H 0.0000
153 S H -0.8046
154 V H -0.9478
155 L H 0.0000
156 Q H 0.0000
157 V H 0.0000
158 V H 0.0000
159 N H 0.0000
160 L H 0.0000
161 P H 0.0000
162 L H 0.0000
163 V H 0.0000
164 E H -1.1502
165 R H -1.4855
166 P H -1.0005
167 V H -0.5927
168 C H 0.0000
169 K H -2.3989
170 A H -1.0350
171 S H -1.0620
172 T H -1.6567
173 R H -2.5642
174 I H -2.1665
175 R H -2.7096
176 I H -1.8399
177 T H -1.3317
178 D H -1.7279
179 N H 0.0000
180 M H 0.0000
181 F H -0.2874
182 C H 0.0000
183 A H 0.0000
184 G H 0.0000
184A Y H -1.9937
185 K H -2.2450
186 P H -2.4457
186A G H -2.4914
186B E H -3.2382
186C G H -2.7099
186D K H -3.3982
187 R H -3.2107
188 G H 0.0000
189 D H 0.0000
190 A H 0.0000
191 C H 0.0000
192 E H -0.7026
193 G H 0.0000
194 D H 0.0000
195 S H -0.0068
196 G H 0.0000
197 G H 0.0000
198 P H 0.0000
199 F H 0.0000
200 V H 0.0000
201 M H 0.0000
202 K H 0.0000
203 S H 0.0000
204 P H 0.1085
204A Y H 0.4407
204B N H -0.3635
205 N H -0.9423
206 R H -0.6865
207 W H 0.0000
208 Y H 0.0000
209 Q H 0.0000
210 M H 0.0000
211 G H 0.0000
212 I H 0.0000
213 V H 0.0000
214 S H 0.0000
215 W H 0.0000
216 G H 0.0000
217 E H 0.0000
219 G H 0.0000
220 C H 0.0000
221 D H 0.0000
221A R H -1.5658
222 D H -2.4412
223 G H -1.4687
224 K H 0.0000
225 Y H 0.0000
226 G H 0.0000
227 F H 0.0000
228 Y H 0.0000
229 T H 0.0000
230 H H -0.6999
231 V H 0.0000
232 F H -1.0443
233 R H -1.7596
234 L H 0.0000
235 K H -2.1887
236 K H -2.9245
237 W H 0.0000
238 I H 0.0000
239 Q H -3.2152
240 K H -3.1290
241 V H 0.0000
242 I H 0.0000
243 D H -1.4698
244 R H -1.8606
245 L H 0.3030
246 G H -0.7721
247 S H -0.9191
1 V I 0.0000
2 V I 0.1357
3 Y I 0.0000
4 T I 0.0000
5 D I -1.2680
6 C I 0.0000
7 T I -1.0342
8 E I -1.9266
9 S I -1.0236
10 G I -0.9765
11 Q I 0.0000
12 N I 0.0000
13 L I -0.5364
14 C I 0.0000
15 L I 0.0000
16 C I 0.0000
17 E I -2.7376
18 G I -1.9894
19 S I -1.3498
20 N I -1.5798
21 V I 0.0000
22 C I 0.0000
23 G I -1.6713
24 Q I -2.2830
25 G I -1.7190
26 N I -1.4489
27 K I -1.3677
28 C I 0.0000
29 I I -0.5591
30 L I -1.3476
31 G I -2.1727
32 S I -2.0739
33 D I -2.9304
34 G I -2.7741
35 E I -3.7528
36 K I -3.7561
37 N I -2.6456
38 Q I -2.0158
39 C I -1.0195
40 V I -0.3666
41 T I -0.7412
42 G I -1.3815
43 E I -2.4544
44 G I -1.5271
45 T I -1.1339
46 P I -0.8854
47 K I -0.7365
48 P I -0.7491
49 Q I -0.9131
50 S I -1.0389
51 H I -1.4560
52 N I -1.2810
53 D I -1.7304
54 G I -2.1149
55 D I -2.9640
56 F I -2.5720
57 E I -2.8747
58 E I -3.1072
59 I I 0.0000
60 P I -2.0802
61 E I -3.1285
62 E I -2.7816
63 Y I -1.4437
64 L I -2.0165
65 Q I -2.0739
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Laboratory of Theory of Biopolymers 2018