Project name: 14116b12231f8b9

Status: done

Started: 2024-12-07 04:53:36
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Chain sequence(s) A: NKTKVIGIGINLEELSPEKIEKKIEEKLEEIDKEYAALKAEGVKHIRFNINIDINDANAENALYALEKLAYRCKELGVDVRLSINLNTDAETTDKVLERLLEIALEFDNVELSVHVNYADAGLVALDKVLEFAEKGIKVGLTITVSYAEDAPAVIEKTIETVKELREKGITGQHIIIVITCELTEEQLQLLRELIEEAKKALEASGKGNSVLVICEGPSKGAKELNEESAKMAQLGSGPDSGSGSG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:33)
Show buried residues

Minimal score value
-4.8955
Maximal score value
0.4324
Average score
-1.3822
Total score value
-340.0275

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -2.5498
2 K A -2.7409
3 T A -1.9244
4 K A -1.4678
5 V A -0.2765
6 I A -0.1954
7 G A -0.6675
8 I A 0.0000
9 G A -1.1508
10 I A 0.0000
11 N A -1.9013
12 L A 0.0000
13 E A -2.5710
14 E A -2.5939
15 L A -2.1846
16 S A -1.9778
17 P A -2.5777
18 E A -3.6784
19 K A -3.9455
20 I A 0.0000
21 E A -4.5279
22 K A -4.8955
23 K A -3.8397
24 I A 0.0000
25 E A -4.7695
26 E A -4.4576
27 K A -3.3158
28 L A -3.1290
29 E A -4.0704
30 E A -3.5157
31 I A 0.0000
32 D A -2.4295
33 K A -3.1971
34 E A -2.2715
35 Y A -1.7325
36 A A -1.7283
37 A A -1.6313
38 L A 0.0000
39 K A -2.8989
40 A A -1.7398
41 E A -2.6439
42 G A -2.2460
43 V A -2.4538
44 K A -2.9946
45 H A -2.3106
46 I A 0.0000
47 R A -0.7691
48 F A 0.0000
49 N A -0.9440
50 I A 0.0000
51 N A -1.5241
52 I A 0.0000
53 D A -1.7927
54 I A 0.0000
55 N A -2.0789
56 D A -2.4487
57 A A -1.6534
58 N A 0.0000
59 A A 0.0000
60 E A -2.2489
61 N A -1.4805
62 A A 0.0000
63 L A 0.0000
64 Y A -0.2587
65 A A 0.0000
66 L A 0.0000
67 E A -0.6621
68 K A -1.1378
69 L A 0.0000
70 A A 0.0000
71 Y A -1.3184
72 R A -1.6261
73 C A 0.0000
74 K A -2.8722
75 E A -2.5161
76 L A -1.3790
77 G A -1.4771
78 V A -1.3787
79 D A -1.5728
80 V A 0.0000
81 R A -1.5567
82 L A 0.0000
83 S A -1.1172
84 I A 0.0000
85 N A -1.2445
86 L A 0.0000
87 N A -1.6723
88 T A 0.0000
89 D A -2.3754
90 A A -2.2055
91 E A -3.0312
92 T A -2.8104
93 T A 0.0000
94 D A -2.9740
95 K A -3.0729
96 V A 0.0000
97 L A 0.0000
98 E A -3.2697
99 R A -2.4567
100 L A 0.0000
101 L A 0.0000
102 E A -1.6538
103 I A 0.0000
104 A A 0.0000
105 L A -0.1797
106 E A -1.4718
107 F A -1.8492
108 D A -2.5608
109 N A -2.8761
110 V A 0.0000
111 E A -2.6047
112 L A 0.0000
113 S A -1.0314
114 V A 0.0000
115 H A -0.6854
116 V A 0.0000
117 N A -0.6685
118 Y A -0.2563
119 A A 0.0000
120 D A -1.6503
121 A A 0.0000
122 G A 0.0000
123 L A -0.6838
124 V A -1.1317
125 A A 0.0000
126 L A 0.0000
127 D A -2.3220
128 K A -2.0442
129 V A 0.0000
130 L A -2.1426
131 E A -2.9752
132 F A 0.0000
133 A A 0.0000
134 E A -3.2586
135 K A -2.2642
136 G A -2.1022
137 I A 0.0000
138 K A -2.5726
139 V A 0.0000
140 G A -0.8355
141 L A 0.0000
142 T A -0.1084
143 I A 0.0000
144 T A 0.3126
145 V A 0.0000
146 S A -0.1328
147 Y A 0.3126
148 A A -0.9172
149 E A -1.7250
150 D A -1.2724
151 A A 0.0000
152 P A -1.2938
153 A A -1.1647
154 V A 0.0000
155 I A 0.0000
156 E A -2.0917
157 K A -1.9101
158 T A 0.0000
159 I A -2.0836
160 E A -3.0698
161 T A 0.0000
162 V A 0.0000
163 K A -3.1893
164 E A -3.2955
165 L A 0.0000
166 R A -3.1825
167 E A -3.5827
168 K A -3.5304
169 G A -2.3698
170 I A -1.7542
171 T A -1.3542
172 G A -1.1342
173 Q A 0.0000
174 H A -0.5592
175 I A 0.0000
176 I A 0.4324
177 I A 0.0000
178 V A 0.1124
179 I A 0.0000
180 T A -0.7903
181 C A -1.1268
182 E A -2.4082
183 L A 0.0000
184 T A -2.4308
185 E A -3.3210
186 E A -2.9087
187 Q A -2.4813
188 L A 0.0000
189 Q A -2.5713
190 L A -2.2404
191 L A 0.0000
192 R A -3.2271
193 E A -3.1328
194 L A 0.0000
195 I A 0.0000
196 E A -3.3220
197 E A 0.0000
198 A A -2.1193
199 K A -2.5698
200 K A -2.9942
201 A A 0.0000
202 L A -2.1680
203 E A -2.8088
204 A A -2.0336
205 S A -1.7151
206 G A -1.8851
207 K A -2.2024
208 G A -1.4106
209 N A -0.9116
210 S A 0.0000
211 V A 0.0000
212 L A -0.0981
213 V A 0.0000
214 I A -0.2702
215 C A 0.0000
216 E A -2.2418
217 G A -1.8235
218 P A -1.8948
219 S A 0.0000
220 K A -2.8792
221 G A -2.3467
222 A A 0.0000
223 K A -3.8652
224 E A -3.9680
225 L A 0.0000
226 N A -3.0557
227 E A -4.0447
228 E A -3.7775
229 S A 0.0000
230 A A -2.1234
231 K A -2.7324
232 M A 0.0000
233 A A 0.0000
234 Q A -1.4237
235 L A -0.7704
236 G A 0.0000
237 S A -1.2779
238 G A -1.5465
239 P A -1.4858
240 D A -2.2789
241 S A -1.7355
242 G A -1.5804
243 S A -1.1726
244 G A -0.8391
245 S A -0.7830
246 G A -0.7332
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Laboratory of Theory of Biopolymers 2018