Project name: CMProt B1 Model4

Status: done

Started: 2026-02-12 14:24:53
Settings
Chain sequence(s) A: SSLFTFLCLAVFINGCLSQI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-0.0154
Maximal score value
4.9463
Average score
2.8309
Total score value
56.6176

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 1.2787
2 S A 1.7825
3 L A 3.5699
4 F A 3.9684
5 T A 3.3575
6 F A 4.7922
7 L A 4.9463
8 C A 4.3130
9 L A 4.5939
10 A A 3.5917
11 V A 4.0456
12 F A 4.1707
13 I A 3.1323
14 N A 1.2379
15 G A 1.5006
16 C A 1.9105
17 L A 2.0449
18 S A 0.5117
19 Q A -0.0154
20 I A 1.8847
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Laboratory of Theory of Biopolymers 2018