| Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
C: GIVEQCCTSICSLYQLENYCN B: FVNQHLCGSHLVEALYLVCGERGFFYTPKT D: FVNQHLCGSHLVEALYLVCGERGFFYTPK input PDB |
| Selected Chain(s) | A,B,C,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5200 | |
| 2 | I | A | 0.0000 | |
| 3 | V | A | -1.5153 | |
| 4 | E | A | -2.4000 | |
| 5 | Q | A | -1.5526 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.5463 | |
| 8 | T | A | -0.4256 | |
| 9 | S | A | 0.3514 | |
| 10 | I | A | 1.9527 | |
| 11 | C | A | 1.2288 | |
| 12 | S | A | 1.3210 | |
| 13 | L | A | 2.0263 | |
| 14 | Y | A | 1.2634 | |
| 15 | Q | A | 0.2426 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -0.9979 | |
| 18 | N | A | -1.5611 | |
| 19 | Y | A | -0.7969 | |
| 20 | C | A | -1.3867 | |
| 21 | N | A | -1.6791 | |
| 1 | F | B | 2.1335 | |
| 2 | V | B | 1.9395 | |
| 3 | N | B | 0.0954 | |
| 4 | Q | B | -0.4144 | |
| 5 | H | B | 0.4348 | |
| 6 | L | B | 0.9233 | |
| 7 | C | B | -0.0283 | |
| 8 | G | B | 0.0000 | |
| 9 | S | B | -0.2445 | |
| 10 | H | B | -1.0040 | |
| 11 | L | B | 0.0000 | |
| 12 | V | B | 0.0000 | |
| 13 | E | B | -0.5831 | |
| 14 | A | B | 0.2741 | |
| 15 | L | B | 0.0000 | |
| 16 | Y | B | 0.0000 | |
| 17 | L | B | 1.2830 | |
| 18 | V | B | 0.6935 | |
| 19 | C | B | 0.0000 | |
| 20 | G | B | -1.0650 | |
| 21 | E | B | -2.7446 | |
| 22 | R | B | -2.5835 | |
| 23 | G | B | 0.0000 | |
| 24 | F | B | 0.0000 | |
| 25 | F | B | 1.1046 | |
| 26 | Y | B | 0.0000 | |
| 27 | T | B | -0.9475 | |
| 28 | P | B | -1.7582 | |
| 29 | K | B | -2.4851 | |
| 1 | G | C | -1.5122 | |
| 2 | I | C | 0.0000 | |
| 3 | V | C | -1.5123 | |
| 4 | E | C | -2.3901 | |
| 5 | Q | C | -1.5801 | |
| 6 | C | C | 0.0000 | |
| 7 | C | C | -0.4868 | |
| 8 | T | C | -0.4357 | |
| 9 | S | C | 0.3194 | |
| 10 | I | C | 1.8943 | |
| 11 | C | C | 1.0900 | |
| 12 | S | C | 1.2015 | |
| 13 | L | C | 1.9864 | |
| 14 | Y | C | 1.1868 | |
| 15 | Q | C | -0.0325 | |
| 16 | L | C | 0.0000 | |
| 17 | E | C | -0.9120 | |
| 18 | N | C | -1.5605 | |
| 19 | Y | C | -0.9659 | |
| 20 | C | C | 0.0000 | |
| 21 | N | C | -1.8511 | |
| 1 | F | D | 2.2773 | |
| 2 | V | D | 2.0498 | |
| 3 | N | D | 0.1717 | |
| 4 | Q | D | -0.0712 | |
| 5 | H | D | 0.6618 | |
| 6 | L | D | 0.9205 | |
| 7 | C | D | 0.0249 | |
| 8 | G | D | 0.0000 | |
| 9 | S | D | -0.2940 | |
| 10 | H | D | -1.0537 | |
| 11 | L | D | 0.0000 | |
| 12 | V | D | 0.0000 | |
| 13 | E | D | -0.7258 | |
| 14 | A | D | 0.2427 | |
| 15 | L | D | 0.0000 | |
| 16 | Y | D | 0.1457 | |
| 17 | L | D | 1.3300 | |
| 18 | V | D | 0.8462 | |
| 19 | C | D | 0.0000 | |
| 20 | G | D | -1.2362 | |
| 21 | E | D | -2.7663 | |
| 22 | R | D | -2.5747 | |
| 23 | G | D | 0.0000 | |
| 24 | F | D | 0.0000 | |
| 25 | F | D | 0.7163 | |
| 26 | Y | D | 0.0000 | |
| 27 | T | D | -1.0574 | |
| 28 | P | D | -1.9205 | |
| 29 | K | D | -2.5036 |