| Chain sequence(s) |
A: ASQLTQSPSSLSASVGDRVTITCRASQDISSALVWYQQKPGKAPKLLIYDASSLESGVPSRFSGSESGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVQLQESGGGVCQPGRSLRLSCQASGFTFSTYGMHWVRQAPGKGLEWVAVIWDDGSYKYRGDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4604 | |
| 2 | S | A | -1.4276 | |
| 3 | Q | A | -1.6738 | |
| 4 | L | A | -1.3762 | |
| 5 | T | A | -1.2187 | |
| 6 | Q | A | -1.0202 | |
| 7 | S | A | -0.8011 | |
| 8 | P | A | -0.5609 | |
| 9 | S | A | -0.7357 | |
| 10 | S | A | -0.8746 | |
| 11 | L | A | -0.6965 | |
| 12 | S | A | -1.1528 | |
| 13 | A | A | -1.1238 | |
| 14 | S | A | -0.9077 | |
| 15 | V | A | 0.1922 | |
| 16 | G | A | -0.6653 | |
| 17 | D | A | -1.5964 | |
| 18 | R | A | -2.2622 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6241 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8786 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.8885 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -2.0154 | |
| 27 | Q | A | -2.6665 | |
| 28 | D | A | -2.8136 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -1.4583 | |
| 31 | S | A | -0.9550 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -1.5162 | |
| 40 | P | A | -1.0515 | |
| 41 | G | A | -1.5556 | |
| 42 | K | A | -2.3085 | |
| 43 | A | A | -1.4711 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.3654 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.0848 | |
| 50 | D | A | -0.2536 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.5286 | |
| 53 | S | A | -0.0727 | |
| 54 | L | A | 0.1593 | |
| 55 | E | A | -0.5032 | |
| 56 | S | A | -0.5035 | |
| 57 | G | A | -0.5637 | |
| 58 | V | A | -0.3827 | |
| 59 | P | A | -0.3610 | |
| 60 | S | A | -0.4306 | |
| 61 | R | A | -0.7333 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.2554 | |
| 64 | G | A | 0.0000 | |
| 65 | S | A | -1.1131 | |
| 66 | E | A | -2.0445 | |
| 67 | S | A | -1.4859 | |
| 68 | G | A | -1.8014 | |
| 69 | T | A | -2.1965 | |
| 70 | D | A | -2.1012 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.9152 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.5772 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -1.3063 | |
| 77 | S | A | -1.0727 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.5790 | |
| 80 | P | A | -1.2139 | |
| 81 | E | A | -1.5641 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | -0.3839 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.7085 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | N | A | -0.3528 | |
| 93 | S | A | -0.2396 | |
| 94 | Y | A | 0.1763 | |
| 95 | P | A | -0.2721 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -0.3625 | |
| 98 | F | A | -0.2881 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -1.0053 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.3064 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.6402 | |
| 106 | I | A | -1.2708 | |
| 107 | K | A | -1.9955 | |
| 108 | G | A | -1.5525 | |
| 109 | G | A | -1.4650 | |
| 110 | G | A | -1.3517 | |
| 111 | G | A | -1.2452 | |
| 112 | S | A | -1.2103 | |
| 113 | G | A | -1.5549 | |
| 114 | G | A | -1.3796 | |
| 115 | G | A | -1.1973 | |
| 116 | G | A | -1.1852 | |
| 117 | S | A | -1.0255 | |
| 118 | G | A | -1.1593 | |
| 119 | G | A | -1.3399 | |
| 120 | G | A | -1.3233 | |
| 121 | G | A | -1.4243 | |
| 122 | S | A | -1.3610 | |
| 123 | Q | A | -1.8181 | |
| 124 | V | A | -0.8668 | |
| 125 | Q | A | -1.5213 | |
| 126 | L | A | 0.0000 | |
| 127 | Q | A | -1.7718 | |
| 128 | E | A | 0.0000 | |
| 129 | S | A | -0.7788 | |
| 130 | G | A | -0.6021 | |
| 131 | G | A | 0.1434 | |
| 132 | G | A | 0.8848 | |
| 133 | V | A | 1.6233 | |
| 134 | C | A | 0.0000 | |
| 135 | Q | A | -1.4586 | |
| 136 | P | A | -2.0790 | |
| 137 | G | A | -2.2104 | |
| 138 | R | A | -2.7266 | |
| 139 | S | A | -2.0622 | |
| 140 | L | A | -1.2861 | |
| 141 | R | A | -2.0558 | |
| 142 | L | A | 0.0000 | |
| 143 | S | A | -0.9500 | |
| 144 | C | A | 0.0000 | |
| 145 | Q | A | -1.5114 | |
| 146 | A | A | 0.0000 | |
| 147 | S | A | -1.1701 | |
| 148 | G | A | -0.9716 | |
| 149 | F | A | -0.2901 | |
| 150 | T | A | -0.1640 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -0.9985 | |
| 153 | T | A | -0.4598 | |
| 154 | Y | A | -0.0163 | |
| 155 | G | A | 0.0000 | |
| 156 | M | A | 0.0000 | |
| 157 | H | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | R | A | 0.0000 | |
| 161 | Q | A | -0.6205 | |
| 162 | A | A | -1.0336 | |
| 163 | P | A | -0.9875 | |
| 164 | G | A | -1.4599 | |
| 165 | K | A | -2.2861 | |
| 166 | G | A | -1.4341 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -0.9815 | |
| 169 | W | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | V | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | W | A | -0.6160 | |
| 175 | D | A | -1.3009 | |
| 176 | D | A | -2.1862 | |
| 177 | G | A | -1.4308 | |
| 178 | S | A | -0.8108 | |
| 179 | Y | A | -0.2022 | |
| 180 | K | A | -0.3320 | |
| 181 | Y | A | -0.2180 | |
| 182 | R | A | -1.4025 | |
| 183 | G | A | 0.0000 | |
| 184 | D | A | -2.6016 | |
| 185 | S | A | -1.9610 | |
| 186 | V | A | 0.0000 | |
| 187 | K | A | -2.7735 | |
| 188 | G | A | -1.8680 | |
| 189 | R | A | -1.6017 | |
| 190 | F | A | 0.0000 | |
| 191 | T | A | -0.9455 | |
| 192 | I | A | 0.0000 | |
| 193 | S | A | -0.4636 | |
| 194 | R | A | -1.3943 | |
| 195 | D | A | -2.1440 | |
| 196 | N | A | -2.2517 | |
| 197 | S | A | -1.7330 | |
| 198 | K | A | -2.5576 | |
| 199 | N | A | -1.9130 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | Y | A | -0.6882 | |
| 203 | L | A | 0.0000 | |
| 204 | Q | A | -1.2040 | |
| 205 | M | A | 0.0000 | |
| 206 | N | A | -1.9095 | |
| 207 | S | A | -1.8756 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -3.1111 | |
| 210 | A | A | -1.9651 | |
| 211 | E | A | -2.4497 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | -0.4432 | |
| 214 | A | A | 0.0000 | |
| 215 | V | A | 0.8243 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | 0.1676 | |
| 221 | D | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | I | A | 1.2740 | |
| 224 | T | A | 1.0677 | |
| 225 | M | A | 1.2714 | |
| 226 | V | A | 0.0000 | |
| 227 | R | A | -1.2670 | |
| 228 | G | A | -0.1596 | |
| 229 | V | A | 1.3173 | |
| 230 | M | A | 1.4659 | |
| 231 | K | A | 0.6618 | |
| 232 | D | A | 0.0000 | |
| 233 | Y | A | 0.2754 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | 0.0029 | |
| 236 | Y | A | 0.1795 | |
| 237 | W | A | -0.5461 | |
| 238 | G | A | 0.0000 | |
| 239 | Q | A | -1.8302 | |
| 240 | G | A | -0.7136 | |
| 241 | T | A | 0.2232 | |
| 242 | L | A | 1.7250 | |
| 243 | V | A | 0.0000 | |
| 244 | T | A | 0.4214 | |
| 245 | V | A | 0.0000 | |
| 246 | S | A | -0.5741 | |
| 247 | S | A | -0.3326 |