| Chain sequence(s) |
A: DIQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYFCQHFDHLPLAFGCGTKVEIKGGGGSGGGGSGGGGSQVQLQESGPGLVKPSETLSLTCTVSGGSVSSGDYAWTWIRQSPGKCLEWIGHIYYSGNTNYNPSLKSRLTISIDTSKTQFSLKLSSVTAADTAIYYCVRDRVTGAFDIWGQGTMVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7894 | |
| 2 | I | A | 0.0000 | |
| 3 | Q | A | -1.1983 | |
| 4 | M | A | 0.0000 | |
| 5 | T | A | -0.0516 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.1504 | |
| 8 | P | A | -0.2090 | |
| 9 | S | A | -0.2772 | |
| 10 | S | A | -0.3736 | |
| 11 | L | A | 0.1663 | |
| 12 | S | A | -0.3498 | |
| 13 | A | A | -0.0450 | |
| 14 | S | A | 0.0868 | |
| 15 | V | A | 0.7408 | |
| 16 | G | A | -0.3629 | |
| 17 | D | A | -1.2156 | |
| 18 | R | A | -2.0018 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.0545 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.0329 | |
| 23 | C | A | 0.0000 | |
| 24 | Q | A | -1.1868 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.4152 | |
| 27 | Q | A | -1.4773 | |
| 28 | D | A | -2.0008 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.3147 | |
| 31 | N | A | -0.8726 | |
| 32 | Y | A | 0.8991 | |
| 33 | L | A | 0.0000 | |
| 34 | N | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -0.2165 | |
| 40 | P | A | -0.3699 | |
| 41 | G | A | -0.6421 | |
| 42 | K | A | -0.7920 | |
| 43 | A | A | -0.1207 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.1264 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.1586 | |
| 50 | D | A | -0.7550 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.3137 | |
| 53 | N | A | -0.4569 | |
| 54 | L | A | 0.3806 | |
| 55 | E | A | -0.2053 | |
| 56 | T | A | -0.2072 | |
| 57 | G | A | -0.4467 | |
| 58 | V | A | 0.0638 | |
| 59 | P | A | -0.1512 | |
| 60 | S | A | -0.3009 | |
| 61 | R | A | -0.3898 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.2006 | |
| 64 | G | A | -0.1573 | |
| 65 | S | A | -0.2623 | |
| 66 | G | A | -0.2929 | |
| 67 | S | A | -0.2622 | |
| 68 | G | A | -0.3420 | |
| 69 | T | A | -0.4720 | |
| 70 | D | A | -1.4784 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.0209 | |
| 73 | F | A | 0.0000 | |
| 74 | T | A | -0.0212 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -0.1983 | |
| 77 | S | A | -0.3433 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.4301 | |
| 80 | P | A | -0.5232 | |
| 81 | E | A | -1.8366 | |
| 82 | D | A | 0.0000 | |
| 83 | I | A | 0.2544 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.2153 | |
| 86 | Y | A | 0.0000 | |
| 87 | F | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | H | A | 0.0000 | |
| 91 | F | A | 0.4362 | |
| 92 | D | A | -0.8320 | |
| 93 | H | A | -1.0334 | |
| 94 | L | A | 0.3234 | |
| 95 | P | A | 0.1085 | |
| 96 | L | A | 0.0000 | |
| 97 | A | A | 0.0128 | |
| 98 | F | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | C | A | 0.5667 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.3725 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.6635 | |
| 106 | I | A | 0.0000 | |
| 107 | K | A | -1.7845 | |
| 108 | G | A | -0.8056 | |
| 109 | G | A | -0.3371 | |
| 110 | G | A | -0.4607 | |
| 111 | G | A | -0.4306 | |
| 112 | S | A | -0.2914 | |
| 113 | G | A | -0.2284 | |
| 114 | G | A | -0.5715 | |
| 115 | G | A | -0.6383 | |
| 116 | G | A | -0.5917 | |
| 117 | S | A | -0.3146 | |
| 118 | G | A | -0.2988 | |
| 119 | G | A | -0.5665 | |
| 120 | G | A | -0.6359 | |
| 121 | G | A | -0.6078 | |
| 122 | S | A | -0.4401 | |
| 123 | Q | A | -0.7764 | |
| 124 | V | A | -0.0740 | |
| 125 | Q | A | -0.5711 | |
| 126 | L | A | 0.0000 | |
| 127 | Q | A | -0.6183 | |
| 128 | E | A | 0.0000 | |
| 129 | S | A | -0.2334 | |
| 130 | G | A | -0.4816 | |
| 131 | P | A | -0.3021 | |
| 132 | G | A | -0.0009 | |
| 133 | L | A | 1.5023 | |
| 134 | V | A | 0.0000 | |
| 135 | K | A | -1.7258 | |
| 136 | P | A | -0.4850 | |
| 137 | S | A | -0.5928 | |
| 138 | E | A | -1.8074 | |
| 139 | T | A | -0.3617 | |
| 140 | L | A | 0.0000 | |
| 141 | S | A | -0.2222 | |
| 142 | L | A | 0.0000 | |
| 143 | T | A | -0.0225 | |
| 144 | C | A | 0.0000 | |
| 145 | T | A | -0.0659 | |
| 146 | V | A | 0.0000 | |
| 147 | S | A | -0.1264 | |
| 148 | G | A | -0.2661 | |
| 149 | G | A | -0.5256 | |
| 150 | S | A | -0.2987 | |
| 151 | V | A | 0.0000 | |
| 152 | S | A | -0.0693 | |
| 153 | S | A | -0.2268 | |
| 154 | G | A | -0.4108 | |
| 155 | D | A | -1.7172 | |
| 156 | Y | A | 0.0838 | |
| 157 | A | A | 0.1237 | |
| 158 | W | A | 0.0000 | |
| 159 | T | A | 0.0000 | |
| 160 | W | A | 0.0000 | |
| 161 | I | A | 0.0000 | |
| 162 | R | A | 0.0000 | |
| 163 | Q | A | -0.1481 | |
| 164 | S | A | -0.1033 | |
| 165 | P | A | -0.3449 | |
| 166 | G | A | -0.8268 | |
| 167 | K | A | -1.7445 | |
| 168 | C | A | -0.0921 | |
| 169 | L | A | 0.0000 | |
| 170 | E | A | -0.6255 | |
| 171 | W | A | 0.0000 | |
| 172 | I | A | 0.0000 | |
| 173 | G | A | 0.0000 | |
| 174 | H | A | -0.1382 | |
| 175 | I | A | 0.0000 | |
| 176 | Y | A | 0.4351 | |
| 177 | Y | A | 0.4193 | |
| 178 | S | A | -0.1865 | |
| 179 | G | A | -0.5262 | |
| 180 | N | A | -1.3246 | |
| 181 | T | A | -0.3984 | |
| 182 | N | A | -0.7038 | |
| 183 | Y | A | 0.1072 | |
| 184 | N | A | -0.1101 | |
| 185 | P | A | -0.2563 | |
| 186 | S | A | -0.2484 | |
| 187 | L | A | 0.0000 | |
| 188 | K | A | -1.7383 | |
| 189 | S | A | -0.5865 | |
| 190 | R | A | -0.4148 | |
| 191 | L | A | 0.0000 | |
| 192 | T | A | -0.0467 | |
| 193 | I | A | 0.0000 | |
| 194 | S | A | -0.0859 | |
| 195 | I | A | 0.2434 | |
| 196 | D | A | -0.4801 | |
| 197 | T | A | -0.1987 | |
| 198 | S | A | -0.5340 | |
| 199 | K | A | -1.7429 | |
| 200 | T | A | -0.3838 | |
| 201 | Q | A | -0.2825 | |
| 202 | F | A | 0.0000 | |
| 203 | S | A | -0.0460 | |
| 204 | L | A | 0.0000 | |
| 205 | K | A | -1.3241 | |
| 206 | L | A | 0.0000 | |
| 207 | S | A | -0.1689 | |
| 208 | S | A | -0.2637 | |
| 209 | V | A | 0.0000 | |
| 210 | T | A | -0.0500 | |
| 211 | A | A | 0.0581 | |
| 212 | A | A | 0.0691 | |
| 213 | D | A | 0.0000 | |
| 214 | T | A | -0.0129 | |
| 215 | A | A | 0.0000 | |
| 216 | I | A | 0.7357 | |
| 217 | Y | A | 0.0000 | |
| 218 | Y | A | 0.0000 | |
| 219 | C | A | 0.0000 | |
| 220 | V | A | 0.0000 | |
| 221 | R | A | -0.2283 | |
| 222 | D | A | 0.0000 | |
| 223 | R | A | 0.1241 | |
| 224 | V | A | 1.7172 | |
| 225 | T | A | 0.2552 | |
| 226 | G | A | 0.0000 | |
| 227 | A | A | 0.0000 | |
| 228 | F | A | 0.0000 | |
| 229 | D | A | -0.2328 | |
| 230 | I | A | 0.2469 | |
| 231 | W | A | 0.1693 | |
| 232 | G | A | 0.0000 | |
| 233 | Q | A | -1.2197 | |
| 234 | G | A | -0.3382 | |
| 235 | T | A | 0.0610 | |
| 236 | M | A | 0.6025 | |
| 237 | V | A | 0.0000 | |
| 238 | T | A | 0.0090 | |
| 239 | V | A | 0.1306 | |
| 240 | S | A | -0.1811 |