| Chain sequence(s) |
A: MAKKVNWYVSCSPRSPEKIQPELKVLANFEGSYWKGVKGYKAQEAFAKELAALPQFLGTTYKKEAAFSTRDRVAPMKTYGFVFVDEEGYLRITEAGKMLANNRRPKDVFLKQLVKWQYPSFQHKGKEYPEEEWSINPLVFVLSLLKKVGGLSKLDIAMFCLTATNNNQVDEIAEEIMQFRNEREKIKGQNKKLEFTENYFFKRFEKIYGNVGKIREGKSDSSHKSKIETKMRNARDVADATTRYFRYTGLFVARGNQLVLNPEKSDLIDEIISSSKVVKNYTRVEEFHEYYGNPSLPQFSFGRQA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:26)
[INFO] Main: Simulation completed successfully. (00:05:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 160 | M | A | 0.0240 | |
| 161 | A | A | -1.0170 | |
| 162 | K | A | -1.8935 | |
| 163 | K | A | -1.6459 | |
| 164 | V | A | -0.3530 | |
| 165 | N | A | -0.1165 | |
| 166 | W | A | 0.0000 | |
| 167 | Y | A | 0.4547 | |
| 168 | V | A | 0.0000 | |
| 169 | S | A | -0.1858 | |
| 170 | C | A | -0.2974 | |
| 171 | S | A | -0.5120 | |
| 172 | P | A | 0.0000 | |
| 173 | R | A | -1.0562 | |
| 174 | S | A | 0.0000 | |
| 175 | P | A | 0.0000 | |
| 176 | E | A | -2.4331 | |
| 177 | K | A | -1.9587 | |
| 178 | I | A | 0.0000 | |
| 179 | Q | A | -1.6267 | |
| 180 | P | A | -1.2677 | |
| 181 | E | A | 0.0000 | |
| 182 | L | A | 0.0000 | |
| 183 | K | A | -1.7081 | |
| 184 | V | A | -1.0265 | |
| 185 | L | A | 0.0000 | |
| 186 | A | A | -1.6255 | |
| 187 | N | A | -1.9215 | |
| 188 | F | A | -1.1579 | |
| 189 | E | A | -1.7969 | |
| 190 | G | A | -1.1157 | |
| 191 | S | A | -1.0798 | |
| 192 | Y | A | -0.8166 | |
| 193 | W | A | 0.0000 | |
| 194 | K | A | -1.8736 | |
| 195 | G | A | -0.5857 | |
| 196 | V | A | 0.5415 | |
| 197 | K | A | -1.2791 | |
| 198 | G | A | 0.0000 | |
| 199 | Y | A | -0.1001 | |
| 200 | K | A | -1.4374 | |
| 201 | A | A | -1.2252 | |
| 202 | Q | A | 0.0000 | |
| 203 | E | A | -1.8011 | |
| 204 | A | A | -1.6377 | |
| 205 | F | A | 0.0000 | |
| 206 | A | A | -1.8360 | |
| 207 | K | A | -2.7714 | |
| 208 | E | A | -2.7908 | |
| 209 | L | A | 0.0000 | |
| 210 | A | A | -0.6558 | |
| 211 | A | A | -0.5133 | |
| 212 | L | A | -0.1945 | |
| 213 | P | A | 0.1709 | |
| 214 | Q | A | -0.1381 | |
| 215 | F | A | 0.5054 | |
| 216 | L | A | 1.0544 | |
| 217 | G | A | 0.1421 | |
| 218 | T | A | 0.0796 | |
| 219 | T | A | -0.3445 | |
| 220 | Y | A | -0.6127 | |
| 221 | K | A | -2.0039 | |
| 222 | K | A | -2.7533 | |
| 223 | E | A | -2.5623 | |
| 224 | A | A | -1.2663 | |
| 225 | A | A | -1.0473 | |
| 226 | F | A | -0.8296 | |
| 227 | S | A | -1.1154 | |
| 228 | T | A | -1.7338 | |
| 229 | R | A | -2.6466 | |
| 230 | D | A | -2.5601 | |
| 231 | R | A | 0.0000 | |
| 232 | V | A | 0.0000 | |
| 233 | A | A | -1.3063 | |
| 234 | P | A | 0.0000 | |
| 235 | M | A | 0.0000 | |
| 236 | K | A | -0.4895 | |
| 237 | T | A | -0.3181 | |
| 238 | Y | A | 0.0000 | |
| 239 | G | A | 0.0000 | |
| 240 | F | A | 0.0000 | |
| 241 | V | A | 0.0000 | |
| 242 | F | A | 0.0000 | |
| 243 | V | A | 0.0000 | |
| 244 | D | A | -2.2410 | |
| 245 | E | A | -3.2796 | |
| 246 | E | A | -2.7690 | |
| 247 | G | A | 0.0000 | |
| 248 | Y | A | -1.0542 | |
| 249 | L | A | 0.0000 | |
| 250 | R | A | -1.2195 | |
| 251 | I | A | 0.0000 | |
| 252 | T | A | 0.0000 | |
| 253 | E | A | -2.5135 | |
| 254 | A | A | 0.0000 | |
| 255 | G | A | 0.0000 | |
| 256 | K | A | -2.2531 | |
| 257 | M | A | -2.3378 | |
| 258 | L | A | 0.0000 | |
| 259 | A | A | 0.0000 | |
| 260 | N | A | -2.7219 | |
| 261 | N | A | -3.2471 | |
| 262 | R | A | -3.4895 | |
| 263 | R | A | -3.7439 | |
| 264 | P | A | -3.1463 | |
| 265 | K | A | -3.1992 | |
| 266 | D | A | -3.1527 | |
| 267 | V | A | 0.0000 | |
| 268 | F | A | 0.0000 | |
| 269 | L | A | 0.0000 | |
| 270 | K | A | -1.0211 | |
| 271 | Q | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | V | A | 0.0000 | |
| 274 | K | A | 0.0000 | |
| 275 | W | A | 0.0000 | |
| 276 | Q | A | 0.0000 | |
| 277 | Y | A | 0.0000 | |
| 278 | P | A | 0.0000 | |
| 279 | S | A | 0.0000 | |
| 280 | F | A | -1.0514 | |
| 281 | Q | A | -0.7526 | |
| 282 | H | A | -1.1719 | |
| 283 | K | A | -1.7920 | |
| 284 | G | A | -2.2961 | |
| 285 | K | A | -2.9976 | |
| 286 | E | A | -2.9392 | |
| 287 | Y | A | 0.0000 | |
| 288 | P | A | 0.0000 | |
| 289 | E | A | -3.2730 | |
| 290 | E | A | -2.8342 | |
| 291 | E | A | -2.2076 | |
| 292 | W | A | 0.0000 | |
| 293 | S | A | -1.4956 | |
| 294 | I | A | 0.0000 | |
| 295 | N | A | 0.0000 | |
| 296 | P | A | 0.0000 | |
| 297 | L | A | 0.0000 | |
| 298 | V | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | V | A | 0.0000 | |
| 301 | L | A | 0.0000 | |
| 302 | S | A | -1.3423 | |
| 303 | L | A | 0.0000 | |
| 304 | L | A | 0.0000 | |
| 305 | K | A | -2.6242 | |
| 306 | K | A | -3.2105 | |
| 307 | V | A | 0.0000 | |
| 308 | G | A | -1.4551 | |
| 309 | G | A | 0.0000 | |
| 310 | L | A | 0.0000 | |
| 311 | S | A | -1.3361 | |
| 312 | K | A | -1.5920 | |
| 313 | L | A | -0.7207 | |
| 314 | D | A | -0.5034 | |
| 315 | I | A | 0.0000 | |
| 316 | A | A | 0.0000 | |
| 317 | M | A | 0.0000 | |
| 318 | F | A | 0.0000 | |
| 319 | C | A | 0.0000 | |
| 320 | L | A | 0.0000 | |
| 321 | T | A | 0.0395 | |
| 322 | A | A | 0.0000 | |
| 323 | T | A | 0.0000 | |
| 324 | N | A | -1.4205 | |
| 325 | N | A | -1.5605 | |
| 326 | N | A | -2.2531 | |
| 327 | Q | A | -2.3111 | |
| 328 | V | A | 0.0000 | |
| 329 | D | A | -3.7615 | |
| 330 | E | A | -3.4203 | |
| 331 | I | A | 0.0000 | |
| 332 | A | A | 0.0000 | |
| 333 | E | A | -3.5093 | |
| 334 | E | A | -2.3749 | |
| 335 | I | A | 0.0000 | |
| 336 | M | A | -1.9709 | |
| 337 | Q | A | -2.7041 | |
| 338 | F | A | 0.0000 | |
| 339 | R | A | -2.9651 | |
| 340 | N | A | -3.7153 | |
| 341 | E | A | -3.9281 | |
| 342 | R | A | -3.9282 | |
| 343 | E | A | -4.3605 | |
| 344 | K | A | -3.9788 | |
| 345 | I | A | -3.4543 | |
| 346 | K | A | -3.5050 | |
| 347 | G | A | -2.9977 | |
| 348 | Q | A | -3.1608 | |
| 349 | N | A | -3.1004 | |
| 350 | K | A | -3.6284 | |
| 351 | K | A | -3.3595 | |
| 352 | L | A | -1.5473 | |
| 353 | E | A | -2.8402 | |
| 354 | F | A | -1.8412 | |
| 355 | T | A | 0.0000 | |
| 356 | E | A | -1.8934 | |
| 357 | N | A | -1.9064 | |
| 358 | Y | A | -1.2900 | |
| 359 | F | A | 0.0000 | |
| 360 | F | A | -2.1476 | |
| 361 | K | A | -2.6975 | |
| 362 | R | A | -1.8842 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.9331 | |
| 365 | K | A | -2.5947 | |
| 366 | I | A | -1.1685 | |
| 367 | Y | A | 0.0000 | |
| 368 | G | A | -1.4326 | |
| 369 | N | A | -0.7494 | |
| 370 | V | A | -0.6978 | |
| 371 | G | A | -1.4566 | |
| 372 | K | A | -2.5842 | |
| 373 | I | A | -2.4809 | |
| 374 | R | A | -4.0308 | |
| 375 | E | A | -3.8292 | |
| 376 | G | A | -3.2051 | |
| 377 | K | A | -3.8611 | |
| 378 | S | A | -3.0146 | |
| 379 | D | A | -2.9361 | |
| 380 | S | A | -2.0891 | |
| 381 | S | A | -1.8514 | |
| 382 | H | A | -2.6070 | |
| 383 | K | A | -2.8966 | |
| 384 | S | A | -2.2956 | |
| 385 | K | A | -2.3604 | |
| 386 | I | A | 0.0000 | |
| 387 | E | A | -2.9636 | |
| 388 | T | A | -2.3469 | |
| 389 | K | A | -2.5064 | |
| 390 | M | A | 0.0000 | |
| 391 | R | A | -3.5268 | |
| 392 | N | A | -3.0331 | |
| 393 | A | A | 0.0000 | |
| 394 | R | A | -2.5946 | |
| 395 | D | A | -2.3843 | |
| 396 | V | A | -1.2050 | |
| 397 | A | A | 0.0000 | |
| 398 | D | A | -1.2439 | |
| 399 | A | A | 0.0000 | |
| 400 | T | A | 0.0000 | |
| 401 | T | A | 0.0000 | |
| 402 | R | A | -1.7928 | |
| 403 | Y | A | 0.0000 | |
| 404 | F | A | 0.0000 | |
| 405 | R | A | -1.6473 | |
| 406 | Y | A | -1.5212 | |
| 407 | T | A | 0.0000 | |
| 408 | G | A | -1.1025 | |
| 409 | L | A | 0.0000 | |
| 410 | F | A | 0.0000 | |
| 411 | V | A | -0.5777 | |
| 412 | A | A | -1.5717 | |
| 413 | R | A | -2.4367 | |
| 414 | G | A | -2.1021 | |
| 415 | N | A | -2.4551 | |
| 416 | Q | A | -2.1012 | |
| 417 | L | A | 0.0000 | |
| 418 | V | A | 0.0000 | |
| 419 | L | A | -0.8738 | |
| 420 | N | A | 0.0000 | |
| 421 | P | A | -1.4323 | |
| 422 | E | A | -2.5337 | |
| 423 | K | A | -2.3961 | |
| 424 | S | A | -2.4371 | |
| 425 | D | A | -3.0376 | |
| 426 | L | A | 0.0000 | |
| 427 | I | A | 0.0000 | |
| 428 | D | A | -2.6171 | |
| 429 | E | A | -1.6465 | |
| 430 | I | A | 0.0000 | |
| 431 | I | A | -0.6728 | |
| 432 | S | A | -0.8237 | |
| 433 | S | A | -0.9558 | |
| 434 | S | A | -0.7014 | |
| 435 | K | A | -1.4084 | |
| 436 | V | A | -0.8338 | |
| 437 | V | A | -1.1444 | |
| 438 | K | A | -2.4591 | |
| 439 | N | A | -2.8141 | |
| 440 | Y | A | 0.0000 | |
| 441 | T | A | -2.1292 | |
| 442 | R | A | -3.0928 | |
| 443 | V | A | 0.0000 | |
| 444 | E | A | -3.2230 | |
| 445 | E | A | -3.6110 | |
| 446 | F | A | 0.0000 | |
| 447 | H | A | 0.0000 | |
| 448 | E | A | -2.8312 | |
| 449 | Y | A | -1.3467 | |
| 450 | Y | A | 0.0000 | |
| 451 | G | A | 0.0000 | |
| 452 | N | A | -1.2066 | |
| 453 | P | A | -1.0832 | |
| 454 | S | A | -0.9183 | |
| 455 | L | A | -0.4289 | |
| 456 | P | A | -0.6018 | |
| 457 | Q | A | -1.2457 | |
| 458 | F | A | 0.0000 | |
| 459 | S | A | -0.0379 | |
| 460 | F | A | 0.7456 | |
| 461 | G | A | -0.9928 | |
| 462 | R | A | -2.1766 | |
| 463 | Q | A | -1.8557 | |
| 464 | A | A | -0.8566 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine