Project name: 146d57eda868a33

Status: done

Started: 2025-12-26 19:09:19
Settings
Chain sequence(s) A: DSNTVSSFQVDCFLWHVRKRFADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILEEESDEALKMTIASVPASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFAW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:23)
Show buried residues

Minimal score value
-3.4289
Maximal score value
2.311
Average score
-0.9583
Total score value
-193.5864

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 D A -2.2142
3 S A -1.5479
4 N A -1.8714
5 T A -1.0746
6 V A -0.2278
7 S A -0.6780
8 S A -0.9792
9 F A 0.0000
10 Q A 0.0000
11 V A -0.6717
12 D A -1.6385
13 C A 0.0000
14 F A -0.7966
15 L A -0.5287
16 W A -1.2739
17 H A -1.2377
18 V A -0.8999
19 R A -1.5816
20 K A -2.9204
21 R A -2.9446
22 F A -1.3570
23 A A -2.2550
24 D A -3.4040
25 Q A -2.7520
26 E A -2.6883
27 L A -0.4725
28 G A -1.4617
29 D A -1.8193
30 A A -1.4237
31 P A -1.7231
32 F A -1.5597
33 L A -2.1574
34 D A -3.4289
35 R A -3.3256
36 L A 0.0000
37 R A -3.2583
38 A A -2.2558
39 D A -2.7376
40 Q A -2.7682
41 A A -1.9821
42 S A -1.8705
43 L A 0.0000
44 R A -2.9770
45 G A -2.2921
46 R A -2.7926
47 G A 0.0000
48 S A -1.7356
49 T A -1.1469
50 L A -0.3368
51 G A -0.8609
52 L A -1.1612
53 D A -2.5268
54 I A -2.0347
55 E A -2.1969
56 T A -1.3585
57 A A 0.0000
58 T A -1.3724
59 R A -1.0396
60 A A 0.0000
61 G A 0.0000
62 K A -1.7285
63 Q A -1.4664
64 I A -1.0417
65 V A 0.0000
66 E A -3.1171
67 R A -3.1469
68 I A -1.2207
69 L A -1.5350
70 E A -3.4109
71 E A -3.3990
72 E A -2.9547
73 S A -2.8674
74 D A -3.0693
75 E A -2.7076
76 A A -1.0335
77 L A -0.0842
78 K A -1.0912
79 M A 0.6280
80 T A 1.0455
81 I A 2.3110
82 A A 1.5898
83 S A 1.1651
84 V A 1.9270
85 P A 0.7416
86 A A 0.1957
87 S A -0.2646
88 R A -0.8802
89 Y A 0.6569
90 L A 0.5209
91 T A 0.5420
92 D A -0.3543
93 M A 0.0000
94 T A -0.0904
95 L A 0.2561
96 E A -1.6487
97 E A -1.5224
98 M A -0.6959
99 S A -1.6026
100 R A -2.9804
101 D A -2.2287
102 W A 0.0531
103 F A 2.1287
104 M A 1.6839
105 L A 2.0879
106 M A 1.0335
107 P A -0.2476
108 K A -2.1857
109 Q A -2.2408
110 K A -1.2154
111 V A 0.8903
112 A A 0.3270
113 G A -0.3697
114 S A 0.3330
115 L A 0.0000
116 C A 0.1266
117 I A 0.0000
118 R A -1.3304
119 M A -0.6910
120 D A 0.0000
121 Q A -0.1740
122 A A 0.0755
123 I A -0.2602
124 M A -0.9342
125 D A -2.7722
126 K A -3.0117
127 N A -3.1445
128 I A 0.0000
129 I A -0.8381
130 L A 0.0000
131 K A -0.6892
132 A A 0.0000
133 N A 0.0000
134 F A 0.0000
135 S A 0.0000
136 V A 0.0000
137 I A -0.2995
138 F A 0.1305
139 D A -2.0974
140 R A -2.6878
141 L A 0.0000
142 E A -2.4821
143 T A -1.0852
144 L A 0.0000
145 I A 1.3215
146 L A 0.6133
147 L A 0.0000
148 R A 0.0000
149 A A 0.0000
150 F A 0.0000
151 T A 0.0000
152 E A -3.2933
153 E A -3.1489
154 G A -1.8205
155 A A -1.3960
156 I A -0.2367
157 V A 0.0000
158 G A 0.0000
159 E A 0.0000
160 I A 0.0000
161 S A 0.4589
162 P A 0.4498
163 L A 0.5081
164 P A -0.0203
165 S A 0.1001
166 L A 0.3328
167 P A -0.0475
168 G A -0.1796
169 H A -1.0032
170 T A -1.8456
171 D A -2.8449
172 E A -3.3721
173 D A -2.3704
174 V A 0.0000
175 K A -2.4543
176 N A -2.3511
177 A A 0.0000
178 I A 0.0000
179 G A -0.6624
180 V A -0.3588
181 L A 0.0000
182 I A -0.1671
183 G A -0.0086
184 G A -0.3464
185 L A 0.0000
186 E A -1.3270
187 W A 0.0201
188 N A -1.2621
189 D A -2.5399
190 N A 0.0000
191 T A -1.8044
192 V A 0.0000
193 R A -2.2131
194 V A 0.0000
195 S A 0.0000
196 E A -2.9119
197 T A -1.8257
198 L A 0.0000
199 Q A -2.5500
200 R A -3.0995
201 F A -1.8928
202 A A -1.5731
203 W A -0.3950
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018