| Chain sequence(s) |
A: MARTKQTARKSTGGKAPRKQLATKVVVRFQLGSILRRGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23)
[INFO] Main: Simulation completed successfully. (00:01:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5331 | |
| 2 | A | A | -0.6839 | |
| 3 | R | A | -2.3100 | |
| 4 | T | A | -1.9711 | |
| 5 | K | A | -2.8873 | |
| 6 | Q | A | -2.7078 | |
| 7 | T | A | -2.1225 | |
| 8 | A | A | -2.1669 | |
| 9 | R | A | -3.0004 | |
| 10 | K | A | -2.8819 | |
| 11 | S | A | -2.1319 | |
| 12 | T | A | -1.8151 | |
| 13 | G | A | -1.8178 | |
| 14 | G | A | -1.7773 | |
| 15 | K | A | -2.7272 | |
| 16 | A | A | -2.5012 | |
| 17 | P | A | -2.1815 | |
| 18 | R | A | -2.9673 | |
| 19 | K | A | -3.1280 | |
| 20 | Q | A | -1.9559 | |
| 21 | L | A | -0.1422 | |
| 22 | A | A | -0.4036 | |
| 23 | T | A | -0.1809 | |
| 24 | K | A | -0.3161 | |
| 25 | V | A | 1.2214 | |
| 26 | V | A | 2.1143 | |
| 27 | V | A | 1.1609 | |
| 28 | R | A | 0.0305 | |
| 29 | F | A | 2.0134 | |
| 30 | Q | A | 0.8244 | |
| 31 | L | A | 1.1614 | |
| 32 | G | A | 0.6235 | |
| 33 | S | A | 0.1228 | |
| 34 | I | A | 1.1063 | |
| 35 | L | A | 1.0711 | |
| 36 | R | A | -1.4836 | |
| 37 | R | A | -1.6259 | |
| 38 | G | A | -0.4338 | |
| 39 | C | A | 0.1145 |