Chain sequence(s) |
H: QVQLQESGGGVVQPGRSLRLSCAASGFSLTIYGVHWVRQAPGKGLEWLGVVWSDGRTDYNPSLKSRLTISKDNSKNTVYLQMNSLRAEDTAVYYCARYYLGSSFLTYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSVSQGISNYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQYSILPWTFGQGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59) [INFO] Main: Simulation completed successfully. (00:01:00) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5076 | |
2 | V | H | -0.9727 | |
3 | Q | H | -1.6994 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.8263 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.8120 | |
8 | G | H | -0.4063 | |
9 | G | H | 0.2326 | |
11 | G | H | 0.8258 | |
12 | V | H | 1.5780 | |
13 | V | H | -0.2920 | |
14 | Q | H | -1.6686 | |
15 | P | H | -2.0456 | |
16 | G | H | -2.1953 | |
17 | R | H | -2.7569 | |
18 | S | H | -1.8042 | |
19 | L | H | -0.8543 | |
20 | R | H | -1.1065 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.6334 | |
23 | C | H | 0.0000 | |
24 | A | H | -1.0447 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.2491 | |
27 | G | H | -1.0390 | |
28 | F | H | -0.1774 | |
29 | S | H | -0.0354 | |
30 | L | H | 0.0000 | |
35 | T | H | -0.1656 | |
36 | I | H | 1.3246 | |
37 | Y | H | 1.1398 | |
38 | G | H | 0.0000 | |
39 | V | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5825 | |
45 | A | H | -1.0288 | |
46 | P | H | -1.0264 | |
47 | G | H | -1.4525 | |
48 | K | H | -2.3391 | |
49 | G | H | -1.5594 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.9047 | |
52 | W | H | 0.0000 | |
53 | L | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | V | H | 0.0000 | |
56 | V | H | 0.0000 | |
57 | W | H | -0.9812 | |
58 | S | H | -0.8902 | |
59 | D | H | -2.2742 | |
63 | G | H | -2.1749 | |
64 | R | H | -2.6288 | |
65 | T | H | -1.4660 | |
66 | D | H | -1.1062 | |
67 | Y | H | -0.6435 | |
68 | N | H | -0.9534 | |
69 | P | H | -1.1141 | |
70 | S | H | -0.7919 | |
71 | L | H | 0.0000 | |
72 | K | H | -1.5914 | |
74 | S | H | -1.0440 | |
75 | R | H | -0.9509 | |
76 | L | H | 0.0000 | |
77 | T | H | -0.6075 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.6883 | |
80 | K | H | -1.2161 | |
81 | D | H | -1.8016 | |
82 | N | H | -2.3325 | |
83 | S | H | -1.8859 | |
84 | K | H | -2.5061 | |
85 | N | H | -1.8841 | |
86 | T | H | -1.3873 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.3069 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.7005 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.5773 | |
93 | S | H | -1.7570 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.5834 | |
96 | A | H | -1.7015 | |
97 | E | H | -2.2699 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.3484 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7900 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | Y | H | 1.0296 | |
108 | Y | H | 1.5062 | |
109 | L | H | 1.5091 | |
110 | G | H | 0.2441 | |
112 | S | H | 0.6165 | |
113 | S | H | 0.5890 | |
114 | F | H | 0.0000 | |
115 | L | H | 0.0000 | |
116 | T | H | 0.3090 | |
117 | Y | H | 0.2153 | |
118 | W | H | -0.4371 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.9787 | |
121 | G | H | -0.7749 | |
122 | T | H | 0.1680 | |
123 | L | H | 1.6726 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.4327 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.3830 | |
128 | S | H | -0.4648 | |
1 | D | L | -1.9139 | |
2 | I | L | 0.0000 | |
3 | Q | L | -1.9542 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.8575 | |
6 | Q | L | 0.0000 | |
7 | S | L | -0.4341 | |
8 | P | L | -0.6842 | |
9 | S | L | -0.9845 | |
10 | S | L | -1.3044 | |
11 | L | L | -1.0055 | |
12 | S | L | -1.3272 | |
13 | A | L | -1.1503 | |
14 | S | L | -0.8957 | |
15 | V | L | -0.0093 | |
16 | G | L | -0.8700 | |
17 | D | L | -1.9242 | |
18 | R | L | -2.3490 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.6673 | |
21 | I | L | 0.0000 | |
22 | T | L | -0.4968 | |
23 | C | L | 0.0000 | |
24 | S | L | -1.1743 | |
25 | V | L | 0.0000 | |
26 | S | L | -1.5082 | |
27 | Q | L | -1.6110 | |
28 | G | L | -1.1904 | |
29 | I | L | 0.0000 | |
36 | S | L | -0.3405 | |
37 | N | L | -0.1252 | |
38 | Y | L | 0.9493 | |
39 | L | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -1.1978 | |
45 | K | L | -1.5111 | |
46 | P | L | -1.0678 | |
47 | G | L | -1.6479 | |
48 | K | L | -2.5467 | |
49 | A | L | -1.5544 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.2104 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.8873 | |
56 | Y | L | 1.2343 | |
57 | T | L | 0.0000 | |
65 | S | L | 0.1692 | |
66 | S | L | 0.3678 | |
67 | L | L | 0.3930 | |
68 | H | L | -0.1964 | |
69 | S | L | -0.3790 | |
70 | G | L | -0.5051 | |
71 | V | L | -0.2969 | |
72 | P | L | -0.3214 | |
74 | S | L | -0.3616 | |
75 | R | L | -0.7590 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.2657 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.5946 | |
80 | G | L | -1.0074 | |
83 | S | L | -1.0795 | |
84 | G | L | -1.1959 | |
85 | T | L | -1.4740 | |
86 | D | L | -2.0039 | |
87 | Y | L | 0.0000 | |
88 | T | L | -0.5848 | |
89 | F | L | 0.0000 | |
90 | T | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.4403 | |
93 | S | L | -1.2628 | |
94 | L | L | 0.0000 | |
95 | Q | L | -0.8658 | |
96 | P | L | -1.1532 | |
97 | E | L | -1.6478 | |
98 | D | L | 0.0000 | |
99 | I | L | -0.6206 | |
100 | A | L | 0.0000 | |
101 | T | L | 0.0000 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | S | L | 0.7705 | |
109 | I | L | 1.4847 | |
114 | L | L | 0.7193 | |
115 | P | L | -0.0264 | |
116 | W | L | 0.0000 | |
117 | T | L | -0.5553 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | Q | L | -1.7161 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -2.1933 | |
124 | V | L | 0.0000 | |
125 | E | L | -1.7621 | |
126 | I | L | -1.1234 | |
127 | K | L | -1.6780 |