| Chain sequence(s) |
A: MSHHHHHHSGSEYAERLTGDREKGEELLREMREEIAKILKENGIEIEPDSPEMLEFMRRVLEAALEEELELPELRIEKYYYDDYHLRYLGKELARDNEKVVKVVRDFVVKKAKEQGIPEEKGEEVAEEVLEVVGYYLAKMLYAGLLSKRNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:07)
[INFO] Main: Simulation completed successfully. (00:08:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5457 | |
| 2 | S | A | -0.6267 | |
| 3 | H | A | -1.7423 | |
| 4 | H | A | -2.3423 | |
| 5 | H | A | -2.6617 | |
| 6 | H | A | -2.5750 | |
| 7 | H | A | -2.6232 | |
| 8 | H | A | -2.1532 | |
| 9 | S | A | -1.6185 | |
| 10 | G | A | 0.0000 | |
| 11 | S | A | -2.6714 | |
| 12 | E | A | -3.1377 | |
| 13 | Y | A | -2.2327 | |
| 14 | A | A | 0.0000 | |
| 15 | E | A | -4.0300 | |
| 16 | R | A | -2.8179 | |
| 17 | L | A | -1.2073 | |
| 18 | T | A | -1.9723 | |
| 19 | G | A | -2.3697 | |
| 20 | D | A | -3.9269 | |
| 21 | R | A | -5.1827 | |
| 22 | E | A | -4.6110 | |
| 23 | K | A | -3.9611 | |
| 24 | G | A | 0.0000 | |
| 25 | E | A | -4.7535 | |
| 26 | E | A | -4.1070 | |
| 27 | L | A | -2.0303 | |
| 28 | L | A | 0.0000 | |
| 29 | R | A | -3.9676 | |
| 30 | E | A | -3.6038 | |
| 31 | M | A | -2.2957 | |
| 32 | R | A | -2.5213 | |
| 33 | E | A | -3.5093 | |
| 34 | E | A | -3.2029 | |
| 35 | I | A | -1.8017 | |
| 36 | A | A | 0.0000 | |
| 37 | K | A | -3.2517 | |
| 38 | I | A | -1.2073 | |
| 39 | L | A | -1.7486 | |
| 40 | K | A | -3.5132 | |
| 41 | E | A | -3.1768 | |
| 42 | N | A | -2.5487 | |
| 43 | G | A | -1.9229 | |
| 44 | I | A | -1.0452 | |
| 45 | E | A | -2.4294 | |
| 46 | I | A | -2.1874 | |
| 47 | E | A | -3.2445 | |
| 48 | P | A | -3.3854 | |
| 49 | D | A | -2.9746 | |
| 50 | S | A | -1.9934 | |
| 51 | P | A | -1.5542 | |
| 52 | E | A | -2.1236 | |
| 53 | M | A | 0.0000 | |
| 54 | L | A | -1.1300 | |
| 55 | E | A | -0.8539 | |
| 56 | F | A | -0.0604 | |
| 57 | M | A | 0.0000 | |
| 58 | R | A | -1.3275 | |
| 59 | R | A | -1.6251 | |
| 60 | V | A | -0.1708 | |
| 61 | L | A | 0.0000 | |
| 62 | E | A | -1.8655 | |
| 63 | A | A | -1.5488 | |
| 64 | A | A | -1.3406 | |
| 65 | L | A | -2.0244 | |
| 66 | E | A | -3.0065 | |
| 67 | E | A | -3.2973 | |
| 68 | E | A | -2.7788 | |
| 69 | L | A | -0.6324 | |
| 70 | E | A | -1.1836 | |
| 71 | L | A | 0.6872 | |
| 72 | P | A | -0.5318 | |
| 73 | E | A | -1.3175 | |
| 74 | L | A | 0.2679 | |
| 75 | R | A | -1.4249 | |
| 76 | I | A | 0.1828 | |
| 77 | E | A | -1.6062 | |
| 78 | K | A | -1.8041 | |
| 79 | Y | A | -0.0852 | |
| 80 | Y | A | 0.8959 | |
| 81 | Y | A | 0.2781 | |
| 82 | D | A | -0.5771 | |
| 83 | D | A | -1.1921 | |
| 84 | Y | A | 0.2894 | |
| 85 | H | A | -0.3108 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -0.9620 | |
| 88 | Y | A | 0.0517 | |
| 89 | L | A | -0.4934 | |
| 90 | G | A | 0.0000 | |
| 91 | K | A | -2.3954 | |
| 92 | E | A | -3.0133 | |
| 93 | L | A | -1.9015 | |
| 94 | A | A | 0.0000 | |
| 95 | R | A | -4.4957 | |
| 96 | D | A | -4.0227 | |
| 97 | N | A | -3.6405 | |
| 98 | E | A | -3.7742 | |
| 99 | K | A | -3.1912 | |
| 100 | V | A | -1.8735 | |
| 101 | V | A | -2.7517 | |
| 102 | K | A | -2.4792 | |
| 103 | V | A | 0.0979 | |
| 104 | V | A | 0.0000 | |
| 105 | R | A | -2.0855 | |
| 106 | D | A | -1.7734 | |
| 107 | F | A | 0.2767 | |
| 108 | V | A | 0.0000 | |
| 109 | V | A | -2.8746 | |
| 110 | K | A | -3.2851 | |
| 111 | K | A | -2.8334 | |
| 112 | A | A | 0.0000 | |
| 113 | K | A | -3.6056 | |
| 114 | E | A | -3.7199 | |
| 115 | Q | A | -2.9363 | |
| 116 | G | A | -2.0132 | |
| 117 | I | A | -1.8373 | |
| 118 | P | A | -2.2288 | |
| 119 | E | A | -3.3656 | |
| 120 | E | A | -3.5744 | |
| 121 | K | A | -3.3129 | |
| 122 | G | A | 0.0000 | |
| 123 | E | A | -4.1378 | |
| 124 | E | A | -4.0032 | |
| 125 | V | A | -2.4022 | |
| 126 | A | A | 0.0000 | |
| 127 | E | A | -3.7249 | |
| 128 | E | A | -2.8960 | |
| 129 | V | A | -1.0534 | |
| 130 | L | A | 0.0000 | |
| 131 | E | A | -1.9219 | |
| 132 | V | A | 0.2219 | |
| 133 | V | A | 0.4320 | |
| 134 | G | A | 0.0000 | |
| 135 | Y | A | 0.0000 | |
| 136 | Y | A | 1.4672 | |
| 137 | L | A | 1.2755 | |
| 138 | A | A | 0.0000 | |
| 139 | K | A | 0.0177 | |
| 140 | M | A | 1.4534 | |
| 141 | L | A | 1.4366 | |
| 142 | Y | A | 1.0666 | |
| 143 | A | A | 0.3240 | |
| 144 | G | A | -0.0376 | |
| 145 | L | A | -0.2914 | |
| 146 | L | A | -0.4035 | |
| 147 | S | A | -1.5456 | |
| 148 | K | A | -2.8122 | |
| 149 | R | A | -3.0609 | |
| 150 | N | A | -2.6197 | |
| 151 | S | A | -1.9255 |