Project name: 90_rank

Status: done

Started: 2026-05-18 11:39:25
Settings
Chain sequence(s) B: SAELEELRRRVHEVIRNLTPDDLYTYINDMYAFRMKLRERGYSAVEVSIVTQALSRAWFDPEDAIRYADELIERDLP
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:04)
Show buried residues

Minimal score value
-3.9675
Maximal score value
1.8739
Average score
-1.3253
Total score value
-102.0483

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S B -1.5458
2 A B -1.8449
3 E B -2.7112
4 L B -2.7319
5 E B -3.7928
6 E B -3.5790
7 L B -2.5467
8 R B -3.3696
9 R B -3.5070
10 R B -2.9370
11 V B 0.0000
12 H B -3.0289
13 E B -3.0848
14 V B 0.0000
15 I B 0.0000
16 R B -3.2875
17 N B -2.5384
18 L B -1.4827
19 T B -1.0378
20 P B -0.7408
21 D B -1.3714
22 D B 0.0000
23 L B 0.7717
24 Y B 1.0454
25 T B 0.2715
26 Y B 0.0000
27 I B 1.8739
28 N B -0.1318
29 D B -0.1847
30 M B 0.9687
31 Y B 0.9159
32 A B -0.0947
33 F B 0.0000
34 R B -0.7896
35 M B -1.0087
36 K B -2.0794
37 L B 0.0000
38 R B -2.9777
39 E B -3.4545
40 R B -2.8454
41 G B -2.0104
42 Y B -1.3176
43 S B -0.5413
44 A B 0.1413
45 V B 0.9866
46 E B 0.0000
47 V B 0.0000
48 S B -0.0779
49 I B 0.0000
50 V B 0.0000
51 T B 0.0000
52 Q B -1.1563
53 A B 0.0000
54 L B 0.0000
55 S B -0.7012
56 R B -2.0561
57 A B -1.5028
58 W B 0.4290
59 F B -0.0638
60 D B -1.8121
61 P B -2.3019
62 E B -3.0769
63 D B -2.5039
64 A B 0.0000
65 I B -2.5567
66 R B -3.0122
67 Y B -2.4185
68 A B 0.0000
69 D B -2.9063
70 E B -3.4677
71 L B -2.7202
72 I B 0.0000
73 E B -3.9395
74 R B -3.9675
75 D B -3.2198
76 L B -1.7853
77 P B -1.6317
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Laboratory of Theory of Biopolymers 2018