| Chain sequence(s) |
A: MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAEEPLHRP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0616 | |
| 2 | A | A | 0.1739 | |
| 3 | T | A | 0.0528 | |
| 4 | L | A | 0.5418 | |
| 5 | E | A | -0.4414 | |
| 6 | K | A | -0.3846 | |
| 7 | L | A | 0.4327 | |
| 8 | M | A | 0.2257 | |
| 9 | K | A | -0.3399 | |
| 10 | A | A | 0.0988 | |
| 11 | F | A | 0.4196 | |
| 12 | E | A | -0.5016 | |
| 13 | S | A | -0.1508 | |
| 14 | L | A | 0.3503 | |
| 15 | K | A | -0.3706 | |
| 16 | S | A | -0.1579 | |
| 17 | F | A | 0.3321 | |
| 18 | Q | A | -0.3344 | |
| 19 | Q | A | -0.4250 | |
| 20 | Q | A | -0.3603 | |
| 21 | Q | A | -0.4788 | |
| 22 | Q | A | -0.4318 | |
| 23 | Q | A | -0.4880 | |
| 24 | Q | A | -0.4716 | |
| 25 | Q | A | -0.3931 | |
| 26 | Q | A | -0.4982 | |
| 27 | Q | A | -0.4790 | |
| 28 | Q | A | -0.4123 | |
| 29 | Q | A | -0.4594 | |
| 30 | Q | A | -0.4434 | |
| 31 | Q | A | -0.4970 | |
| 32 | Q | A | -0.4558 | |
| 33 | Q | A | -0.4624 | |
| 34 | Q | A | -0.4543 | |
| 35 | Q | A | -0.4339 | |
| 36 | Q | A | -0.4425 | |
| 37 | Q | A | -0.4309 | |
| 38 | Q | A | -0.4890 | |
| 39 | Q | A | -0.4449 | |
| 40 | Q | A | -0.4330 | |
| 41 | Q | A | -0.5114 | |
| 42 | Q | A | -0.4470 | |
| 43 | Q | A | -0.4259 | |
| 44 | Q | A | -0.4826 | |
| 45 | Q | A | -0.4740 | |
| 46 | Q | A | -0.4293 | |
| 47 | Q | A | -0.4697 | |
| 48 | Q | A | -0.4787 | |
| 49 | Q | A | -0.4536 | |
| 50 | Q | A | -0.4483 | |
| 51 | Q | A | -0.4789 | |
| 52 | Q | A | -0.4683 | |
| 53 | Q | A | -0.4251 | |
| 54 | Q | A | -0.4808 | |
| 55 | Q | A | -0.4655 | |
| 56 | Q | A | -0.4395 | |
| 57 | Q | A | -0.4832 | |
| 58 | Q | A | -0.4361 | |
| 59 | Q | A | -0.4629 | |
| 60 | Q | A | -0.4145 | |
| 61 | Q | A | -0.4844 | |
| 62 | Q | A | -0.4736 | |
| 63 | Q | A | -0.4000 | |
| 64 | Q | A | -0.4404 | |
| 65 | Q | A | -0.5227 | |
| 66 | Q | A | -0.4789 | |
| 67 | Q | A | -0.4733 | |
| 68 | Q | A | -0.5153 | |
| 69 | Q | A | -0.6943 | |
| 70 | Q | A | -0.6209 | |
| 71 | Q | A | -0.4644 | |
| 72 | P | A | -0.3639 | |
| 73 | P | A | -0.3476 | |
| 74 | P | A | -0.3456 | |
| 75 | P | A | -0.3469 | |
| 76 | P | A | -0.3458 | |
| 77 | P | A | -0.3428 | |
| 78 | P | A | -0.3439 | |
| 79 | P | A | -0.3460 | |
| 80 | P | A | -0.3468 | |
| 81 | P | A | -0.3281 | |
| 82 | P | A | -0.3717 | |
| 83 | Q | A | -0.9214 | |
| 84 | L | A | 0.3471 | |
| 85 | P | A | -0.2806 | |
| 86 | Q | A | -0.8014 | |
| 87 | P | A | -0.4246 | |
| 88 | P | A | -0.3447 | |
| 89 | P | A | -0.3932 | |
| 90 | Q | A | -0.5348 | |
| 91 | A | A | -0.1061 | |
| 92 | Q | A | -0.4718 | |
| 93 | P | A | -0.1858 | |
| 94 | L | A | 0.9656 | |
| 95 | L | A | 0.9453 | |
| 96 | P | A | -0.2329 | |
| 97 | Q | A | -0.7883 | |
| 98 | P | A | -0.4959 | |
| 99 | Q | A | -0.7766 | |
| 100 | P | A | -0.4227 | |
| 101 | P | A | -0.3483 | |
| 102 | P | A | -0.3491 | |
| 103 | P | A | -0.3489 | |
| 104 | P | A | -0.3497 | |
| 105 | P | A | -0.3472 | |
| 106 | P | A | -0.3451 | |
| 107 | P | A | -0.3444 | |
| 108 | P | A | -0.3376 | |
| 109 | P | A | -0.3799 | |
| 110 | G | A | -0.5564 | |
| 111 | P | A | -0.3289 | |
| 112 | A | A | 0.3301 | |
| 113 | V | A | 1.7390 | |
| 114 | A | A | 0.1762 | |
| 115 | E | A | -1.1445 | |
| 116 | E | A | -1.3071 | |
| 117 | P | A | -0.3016 | |
| 118 | L | A | 0.6601 | |
| 119 | H | A | -0.5524 | |
| 120 | R | A | -0.6179 | |
| 121 | P | A | -0.3313 |