Project name: 7VEN

Status: done

Started: 2026-03-29 08:24:20
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Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNHYMHWVRQAPGQGLEWMGIINPISGSTSNAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDIVDAFDFWGQGTMVTVSS
L: AIQLTQSPSSLSASVGDRVTITCRASQGISSALVWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFNDYFTFGPGTKVDIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:06)
Show buried residues

Minimal score value
-2.8248
Maximal score value
1.5541
Average score
-0.5192
Total score value
-115.7821

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5036
2 V H -0.8149
3 Q H -1.1937
4 L H 0.0000
5 V H 0.4696
6 Q H 0.0000
7 S H -0.4778
8 G H -0.4957
9 A H 0.1225
11 E H 0.0944
12 V H 1.0257
13 K H -0.8361
14 K H -2.0819
15 P H -2.0670
16 G H -1.4556
17 A H -1.1452
18 S H -1.3256
19 V H 0.0000
20 K H -1.8796
21 V H 0.0000
22 S H -0.5806
23 C H 0.0000
24 K H -0.8945
25 A H 0.0000
26 S H -0.8302
27 G H -1.0176
28 Y H -0.6199
29 T H -0.4678
30 F H 0.0000
35 T H 0.1190
36 N H -0.7208
37 H H 0.2144
38 Y H 0.9726
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.5600
45 A H -0.9663
46 P H -0.8444
47 G H -1.2469
48 Q H -1.7054
49 G H -1.0867
50 L H 0.0000
51 E H -0.7870
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 I H 0.2538
56 I H 0.0000
57 N H 0.3749
58 P H 0.0000
59 I H 1.5541
62 S H 0.5358
63 G H 0.1286
64 S H -0.0378
65 T H -0.2200
66 S H -0.4670
67 N H -1.1613
68 A H 0.0000
69 Q H -2.4266
70 K H -2.8006
71 F H 0.0000
72 Q H -2.5447
74 G H -1.7057
75 R H -1.5324
76 V H 0.0000
77 T H -0.9616
78 M H 0.0000
79 T H -0.5337
80 R H -0.7008
81 D H -0.9524
82 T H -0.2469
83 S H -0.4905
84 T H -0.6159
85 S H -0.7089
86 T H 0.0000
87 V H 0.0000
88 Y H -0.7184
89 M H 0.0000
90 E H -1.5674
91 L H 0.0000
92 S H -1.1334
93 S H -1.1490
94 L H 0.0000
95 R H -2.7004
96 S H -2.1758
97 E H -2.4232
98 D H 0.0000
99 T H -0.7415
100 A H 0.0000
101 V H 0.2614
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.5118
108 I H 1.1254
109 V H 1.1655
113 D H -0.9783
114 A H 0.0000
115 F H 0.0000
116 D H 0.0000
117 F H 0.6734
118 W H -0.0028
119 G H 0.0000
120 Q H -1.2275
121 G H -0.6084
122 T H 0.0000
123 M H 0.3637
124 V H 0.0000
125 T H -0.1512
126 V H 0.0000
127 S H -1.1419
128 S H -1.1694
1 A L -0.5045
2 I L 0.0000
3 Q L -1.8486
4 L L 0.0000
5 T L -1.2881
6 Q L 0.0000
7 S L -0.6111
8 P L -0.5526
9 S L -0.8287
10 S L -1.0366
11 L L -0.4856
12 S L -0.5596
13 A L 0.0000
14 S L 0.0722
15 V L 0.8886
16 G L -0.3580
17 D L -1.3570
18 R L -2.0457
19 V L 0.0000
20 T L -0.5659
21 I L 0.0000
22 T L -0.8267
23 C L 0.0000
24 R L -2.8248
25 A L 0.0000
26 S L -1.8294
27 Q L -2.2496
28 G L -1.6836
29 I L 0.0000
36 S L -1.1658
37 S L -1.2336
38 A L -1.3113
39 L L 0.0000
40 V L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9150
44 Q L 0.0000
45 K L -1.8457
46 P L -1.3207
47 G L -1.6638
48 K L -2.5414
49 A L -1.4267
50 P L 0.0000
51 K L -1.0230
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3687
56 D L -1.7439
57 A L 0.0000
65 S L -0.7458
66 S L -0.3952
67 L L 0.1464
68 E L -0.1481
69 S L -0.3875
70 G L -0.5087
71 V L -0.3084
72 P L -0.3394
74 S L -0.4034
75 R L -0.7402
76 F L 0.0000
77 S L -0.3004
78 G L -0.4518
79 S L -0.8581
80 G L -1.2394
83 S L -1.2737
84 G L -1.2967
85 T L -1.8384
86 D L -2.2131
87 F L 0.0000
88 T L -0.7452
89 L L 0.0000
90 T L -0.5899
91 I L 0.0000
92 S L -1.1659
93 S L -0.9323
94 L L 0.0000
95 Q L -0.5733
96 P L -0.4663
97 E L -1.5468
98 D L 0.0000
99 F L -0.3455
100 A L 0.0000
101 T L -1.1231
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 F L 0.0000
108 N L -1.5370
114 D L -0.7489
115 Y L 0.6617
116 F L 0.2981
117 T L -0.1639
118 F L 0.0000
119 G L 0.0000
120 P L -0.9295
121 G L 0.0000
122 T L 0.0000
123 K L -2.0097
124 V L 0.0000
125 D L -0.4025
126 I L 1.2111
127 K L -0.6828
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Laboratory of Theory of Biopolymers 2018