| Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTNHYMHWVRQAPGQGLEWMGIINPISGSTSNAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDIVDAFDFWGQGTMVTVSS
L: AIQLTQSPSSLSASVGDRVTITCRASQGISSALVWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQFNDYFTFGPGTKVDIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5036 | |
| 2 | V | H | -0.8149 | |
| 3 | Q | H | -1.1937 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4696 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.4778 | |
| 8 | G | H | -0.4957 | |
| 9 | A | H | 0.1225 | |
| 11 | E | H | 0.0944 | |
| 12 | V | H | 1.0257 | |
| 13 | K | H | -0.8361 | |
| 14 | K | H | -2.0819 | |
| 15 | P | H | -2.0670 | |
| 16 | G | H | -1.4556 | |
| 17 | A | H | -1.1452 | |
| 18 | S | H | -1.3256 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.8796 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5806 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.8945 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8302 | |
| 27 | G | H | -1.0176 | |
| 28 | Y | H | -0.6199 | |
| 29 | T | H | -0.4678 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | 0.1190 | |
| 36 | N | H | -0.7208 | |
| 37 | H | H | 0.2144 | |
| 38 | Y | H | 0.9726 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5600 | |
| 45 | A | H | -0.9663 | |
| 46 | P | H | -0.8444 | |
| 47 | G | H | -1.2469 | |
| 48 | Q | H | -1.7054 | |
| 49 | G | H | -1.0867 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7870 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | I | H | 0.2538 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | 0.3749 | |
| 58 | P | H | 0.0000 | |
| 59 | I | H | 1.5541 | |
| 62 | S | H | 0.5358 | |
| 63 | G | H | 0.1286 | |
| 64 | S | H | -0.0378 | |
| 65 | T | H | -0.2200 | |
| 66 | S | H | -0.4670 | |
| 67 | N | H | -1.1613 | |
| 68 | A | H | 0.0000 | |
| 69 | Q | H | -2.4266 | |
| 70 | K | H | -2.8006 | |
| 71 | F | H | 0.0000 | |
| 72 | Q | H | -2.5447 | |
| 74 | G | H | -1.7057 | |
| 75 | R | H | -1.5324 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.9616 | |
| 78 | M | H | 0.0000 | |
| 79 | T | H | -0.5337 | |
| 80 | R | H | -0.7008 | |
| 81 | D | H | -0.9524 | |
| 82 | T | H | -0.2469 | |
| 83 | S | H | -0.4905 | |
| 84 | T | H | -0.6159 | |
| 85 | S | H | -0.7089 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.7184 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.5674 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1334 | |
| 93 | S | H | -1.1490 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.7004 | |
| 96 | S | H | -2.1758 | |
| 97 | E | H | -2.4232 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7415 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2614 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.5118 | |
| 108 | I | H | 1.1254 | |
| 109 | V | H | 1.1655 | |
| 113 | D | H | -0.9783 | |
| 114 | A | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | F | H | 0.6734 | |
| 118 | W | H | -0.0028 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2275 | |
| 121 | G | H | -0.6084 | |
| 122 | T | H | 0.0000 | |
| 123 | M | H | 0.3637 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1512 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -1.1419 | |
| 128 | S | H | -1.1694 | |
| 1 | A | L | -0.5045 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.8486 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -1.2881 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6111 | |
| 8 | P | L | -0.5526 | |
| 9 | S | L | -0.8287 | |
| 10 | S | L | -1.0366 | |
| 11 | L | L | -0.4856 | |
| 12 | S | L | -0.5596 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | 0.0722 | |
| 15 | V | L | 0.8886 | |
| 16 | G | L | -0.3580 | |
| 17 | D | L | -1.3570 | |
| 18 | R | L | -2.0457 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5659 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8267 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8248 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.8294 | |
| 27 | Q | L | -2.2496 | |
| 28 | G | L | -1.6836 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.1658 | |
| 37 | S | L | -1.2336 | |
| 38 | A | L | -1.3113 | |
| 39 | L | L | 0.0000 | |
| 40 | V | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9150 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8457 | |
| 46 | P | L | -1.3207 | |
| 47 | G | L | -1.6638 | |
| 48 | K | L | -2.5414 | |
| 49 | A | L | -1.4267 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0230 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3687 | |
| 56 | D | L | -1.7439 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7458 | |
| 66 | S | L | -0.3952 | |
| 67 | L | L | 0.1464 | |
| 68 | E | L | -0.1481 | |
| 69 | S | L | -0.3875 | |
| 70 | G | L | -0.5087 | |
| 71 | V | L | -0.3084 | |
| 72 | P | L | -0.3394 | |
| 74 | S | L | -0.4034 | |
| 75 | R | L | -0.7402 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3004 | |
| 78 | G | L | -0.4518 | |
| 79 | S | L | -0.8581 | |
| 80 | G | L | -1.2394 | |
| 83 | S | L | -1.2737 | |
| 84 | G | L | -1.2967 | |
| 85 | T | L | -1.8384 | |
| 86 | D | L | -2.2131 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7452 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5899 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.1659 | |
| 93 | S | L | -0.9323 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5733 | |
| 96 | P | L | -0.4663 | |
| 97 | E | L | -1.5468 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3455 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.1231 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | F | L | 0.0000 | |
| 108 | N | L | -1.5370 | |
| 114 | D | L | -0.7489 | |
| 115 | Y | L | 0.6617 | |
| 116 | F | L | 0.2981 | |
| 117 | T | L | -0.1639 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | P | L | -0.9295 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0097 | |
| 124 | V | L | 0.0000 | |
| 125 | D | L | -0.4025 | |
| 126 | I | L | 1.2111 | |
| 127 | K | L | -0.6828 |