| Chain sequence(s) |
A: HSQGTFTSDYSKYLDSRRAQDFVQWLMNT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | QC24A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.877411 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] FoldX: Building mutant model (00:00:21)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:38)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | -1.3473 | |
| 2 | S | A | -1.3319 | |
| 3 | Q | A | -1.3803 | |
| 4 | G | A | -0.4572 | |
| 5 | T | A | -0.0328 | |
| 6 | F | A | 1.0575 | |
| 7 | T | A | 0.1270 | |
| 8 | S | A | -0.7206 | |
| 9 | D | A | -1.3898 | |
| 10 | Y | A | -0.0648 | |
| 11 | S | A | -1.2119 | |
| 12 | K | A | -2.5737 | |
| 13 | Y | A | -1.5063 | |
| 14 | L | A | -1.9845 | |
| 15 | D | A | -3.7164 | |
| 16 | S | A | -2.8187 | |
| 17 | R | A | -3.8660 | |
| 18 | R | A | -3.7010 | |
| 19 | A | A | -1.8857 | |
| 20 | Q | A | -2.1801 | |
| 21 | D | A | -1.6249 | |
| 22 | F | A | 1.3468 | |
| 23 | V | A | 1.8989 | |
| 24 | C | A | 1.3736 | mutated: QC24A |
| 25 | W | A | 2.1987 | |
| 26 | L | A | 2.4745 | |
| 27 | M | A | 1.8589 | |
| 28 | N | A | 0.4535 | |
| 29 | T | A | 0.5173 |