| Chain sequence(s) |
A: GKITLYEDRGFQGRYECSSDPNLQPYLSRCNSARVDGCWMLYEQPNYSGLQYFLRRGDYADQQWMGLSDSVRSCRLIPSGSRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEISLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:01)
[INFO] Main: Simulation completed successfully. (00:02:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.6756 | |
| 2 | K | A | -2.5994 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.5216 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.6607 | |
| 7 | E | A | -1.8829 | |
| 8 | D | A | -2.5846 | |
| 9 | R | A | -2.6065 | |
| 10 | G | A | -1.5157 | |
| 11 | F | A | -1.3297 | |
| 12 | Q | A | -2.3987 | |
| 13 | G | A | -2.2716 | |
| 14 | R | A | -2.1564 | |
| 16 | Y | A | -0.4678 | |
| 17 | E | A | -1.7595 | |
| 18 | C | A | -1.5542 | |
| 19 | S | A | -1.9204 | |
| 20 | S | A | -1.6589 | |
| 21 | D | A | -2.2446 | |
| 23 | P | A | -2.0335 | |
| 24 | N | A | -2.1853 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.4454 | |
| 27 | P | A | -0.5855 | |
| 28 | Y | A | -0.2632 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.1231 | |
| 31 | R | A | -1.3682 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -1.7833 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.4242 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.0346 | |
| 40 | G | A | -1.3794 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.3095 | |
| 47 | Q | A | -1.7821 | |
| 48 | P | A | -1.8565 | |
| 49 | N | A | -1.9969 | |
| 50 | Y | A | -1.2496 | |
| 51 | S | A | -1.1171 | |
| 52 | G | A | -1.0460 | |
| 53 | L | A | -0.4453 | |
| 54 | Q | A | -0.3971 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.0603 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.3070 | |
| 59 | R | A | -2.1154 | |
| 60 | G | A | -1.8643 | |
| 61 | D | A | -2.7366 | |
| 62 | Y | A | -1.8299 | |
| 63 | A | A | -1.7034 | |
| 64 | D | A | -1.8453 | |
| 66 | Q | A | -1.4108 | |
| 67 | Q | A | -1.7097 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.5168 | |
| 70 | G | A | -0.1403 | |
| 71 | L | A | 0.9816 | |
| 72 | S | A | -0.2101 | |
| 73 | D | A | -1.1579 | |
| 74 | S | A | -0.9923 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.9616 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -1.4220 | |
| 80 | L | A | -0.9577 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.2342 | |
| 84 | S | A | -1.0161 | |
| 85 | G | A | -0.8107 | |
| 86 | S | A | -1.4833 | |
| 88 | R | A | -2.7555 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.2496 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | -2.1020 | |
| 93 | E | A | -2.6620 | |
| 94 | R | A | -4.1566 | |
| 95 | E | A | -3.8002 | |
| 96 | D | A | -3.2474 | |
| 97 | Y | A | -2.7139 | |
| 98 | R | A | -3.4572 | |
| 99 | G | A | -2.5341 | |
| 100 | Q | A | -1.6908 | |
| 101 | M | A | -0.7177 | |
| 102 | I | A | -0.4131 | |
| 103 | E | A | -0.9250 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.2687 | |
| 106 | E | A | -2.7653 | |
| 107 | D | A | -1.9610 | |
| 108 | C | A | -1.6255 | |
| 109 | S | A | -1.1311 | |
| 110 | C | A | -1.1931 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -3.2039 | |
| 113 | D | A | -3.3625 | |
| 114 | R | A | -3.2418 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -3.0329 | |
| 117 | F | A | -1.7856 | |
| 118 | N | A | -2.5450 | |
| 119 | E | A | -3.1596 | |
| 120 | I | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.9231 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.4318 | |
| 127 | E | A | -2.4347 | |
| 128 | G | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.5984 | |
| 135 | L | A | -0.8282 | |
| 136 | S | A | -0.9479 | |
| 137 | N | A | -1.6210 | |
| 138 | Y | A | -1.3976 | |
| 139 | R | A | -2.2441 | |
| 140 | G | A | -1.5292 | |
| 141 | R | A | -1.5571 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.4445 | |
| 147 | P | A | -1.2189 | |
| 148 | G | A | -1.3804 | |
| 149 | D | A | -2.8245 | |
| 150 | Y | A | -3.0497 | |
| 151 | R | A | -4.4417 | |
| 152 | R | A | -4.3222 | |
| 153 | Y | A | -3.0926 | |
| 154 | Q | A | -3.0851 | |
| 155 | D | A | -3.5122 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.7711 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -1.3601 | |
| 160 | N | A | -2.0755 | |
| 161 | A | A | -2.2292 | |
| 162 | R | A | -2.2681 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | -1.4236 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.3350 | |
| 168 | R | A | -1.4619 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | -0.0128 | |
| 171 | D | A | -0.9833 | |
| 172 | F | A | 0.3881 | |
| 173 | S | A | -0.0398 |