| Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
C: GIVEQCCTSICSLYQLENYCN B: FVNQHLCGSHLVEALYLVCGERGFFYTPKA D: FVNQHLCGSHLVEALYLVCGERGFFYTPKA input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.3627 | |
| 2 | I | A | 0.0000 | |
| 3 | V | A | 0.0000 | |
| 4 | E | A | -2.5759 | |
| 5 | Q | A | -1.6029 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -0.3510 | |
| 8 | T | A | -0.3071 | |
| 9 | S | A | 0.3675 | |
| 10 | I | A | 1.8913 | |
| 11 | C | A | 1.0984 | |
| 12 | S | A | 1.2301 | |
| 13 | L | A | 1.8933 | |
| 14 | Y | A | 1.1489 | |
| 15 | Q | A | -0.0566 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -1.1539 | |
| 18 | N | A | -1.5785 | |
| 19 | Y | A | -0.5350 | |
| 20 | C | A | -1.1599 | |
| 21 | N | A | -1.6350 | |
| 1 | F | B | 1.7320 | |
| 2 | V | B | 0.4908 | |
| 3 | N | B | -0.6609 | |
| 4 | Q | B | -1.2772 | |
| 5 | H | B | -1.1070 | |
| 6 | L | B | 0.3382 | |
| 7 | C | B | -0.2966 | |
| 8 | G | B | 0.0000 | |
| 9 | S | B | -0.5256 | |
| 10 | H | B | -1.3128 | |
| 11 | L | B | 0.0000 | |
| 12 | V | B | 0.0000 | |
| 13 | E | B | -1.4488 | |
| 14 | A | B | -0.1338 | |
| 15 | L | B | 0.0000 | |
| 16 | Y | B | -0.0486 | |
| 17 | L | B | 1.4087 | |
| 18 | V | B | 0.8669 | |
| 19 | C | B | 0.0000 | |
| 20 | G | B | -1.0536 | |
| 21 | E | B | -2.7518 | |
| 22 | R | B | -2.6769 | |
| 23 | G | B | 0.0000 | |
| 24 | F | B | 0.0000 | |
| 25 | F | B | 1.7323 | |
| 26 | Y | B | 0.0000 | |
| 27 | T | B | -0.8646 | |
| 28 | P | B | -1.8447 | |
| 29 | K | B | -2.4284 | |
| 30 | A | B | -1.3758 | |
| 1 | G | C | -1.2312 | |
| 2 | I | C | 0.0000 | |
| 3 | V | C | -1.0880 | |
| 4 | E | C | -2.2404 | |
| 5 | Q | C | -1.6530 | |
| 6 | C | C | 0.0000 | |
| 7 | C | C | -0.7689 | |
| 8 | T | C | -0.8436 | |
| 9 | S | C | -0.7201 | |
| 10 | I | C | -0.3575 | |
| 11 | C | C | 0.0000 | |
| 12 | S | C | 0.4663 | |
| 13 | L | C | 1.0182 | |
| 14 | Y | C | 0.6370 | |
| 15 | Q | C | -0.5896 | |
| 16 | L | C | 0.0000 | |
| 17 | E | C | -1.0752 | |
| 18 | N | C | -1.5575 | |
| 19 | Y | C | -0.8377 | |
| 20 | C | C | -1.2876 | |
| 21 | N | C | -1.6885 | |
| 1 | F | D | 2.3797 | |
| 2 | V | D | 1.6699 | |
| 3 | N | D | -0.2962 | |
| 4 | Q | D | -0.6669 | |
| 5 | H | D | -1.1924 | |
| 6 | L | D | 0.0000 | |
| 7 | C | D | -0.4967 | |
| 8 | G | D | -0.2480 | |
| 9 | S | D | -0.7554 | |
| 10 | H | D | -1.4089 | |
| 11 | L | D | 0.0000 | |
| 12 | V | D | 0.0000 | |
| 13 | E | D | -0.8454 | |
| 14 | A | D | 0.0000 | |
| 15 | L | D | 0.0000 | |
| 16 | Y | D | -0.0468 | |
| 17 | L | D | 1.1323 | |
| 18 | V | D | 0.7749 | |
| 19 | C | D | 0.0000 | |
| 20 | G | D | -1.2826 | |
| 21 | E | D | -2.8335 | |
| 22 | R | D | -2.5527 | |
| 23 | G | D | 0.0000 | |
| 24 | F | D | 0.0000 | |
| 25 | F | D | 0.7815 | |
| 26 | Y | D | 0.0000 | |
| 27 | T | D | -0.9034 | |
| 28 | P | D | -1.7851 | |
| 29 | K | D | -2.5813 | |
| 30 | A | D | -1.3467 |