| Chain sequence(s) |
A: SPAPPACDLRVLSKLLRDSHVLHSRLSQCPEVHPLPTPVLLPAVDFSLGEWKTQMEETKAQDILGAVTLLLEGVMAARGQLGPTCLSSLLGQLSGQVRLLLGALQSLLGTQLPPQGRTTAHKDPNAIFLSFQHLLRGKVRFLMLVGGSTLCVRRAPPTTAVPSRTSLVLTLNEL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.3215 | |
| 2 | P | A | -0.4162 | |
| 3 | A | A | -0.0991 | |
| 4 | P | A | -0.3927 | |
| 5 | P | A | -0.5077 | |
| 6 | A | A | 0.0000 | |
| 7 | C | A | 0.1364 | |
| 8 | D | A | -0.6087 | |
| 9 | L | A | -0.4769 | |
| 10 | R | A | -2.0033 | |
| 11 | V | A | -1.0738 | |
| 12 | L | A | 0.0000 | |
| 13 | S | A | -2.1138 | |
| 14 | K | A | -2.8104 | |
| 15 | L | A | 0.0000 | |
| 16 | L | A | -2.0027 | |
| 17 | R | A | -2.4836 | |
| 18 | D | A | -1.6116 | |
| 19 | S | A | 0.0000 | |
| 20 | H | A | -1.4300 | |
| 21 | V | A | -0.3290 | |
| 22 | L | A | 0.0000 | |
| 23 | H | A | -1.0088 | |
| 24 | S | A | -1.0835 | |
| 25 | R | A | -1.7520 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | -1.6005 | |
| 28 | Q | A | -2.0537 | |
| 29 | C | A | 0.0000 | |
| 30 | P | A | -1.4047 | |
| 31 | E | A | -2.1078 | |
| 32 | V | A | -1.2654 | |
| 33 | H | A | -1.3914 | |
| 34 | P | A | -1.5930 | |
| 35 | L | A | 0.0000 | |
| 36 | P | A | -0.8400 | |
| 37 | T | A | -0.4768 | |
| 38 | P | A | -0.6387 | |
| 39 | V | A | 0.0000 | |
| 40 | L | A | 0.8456 | |
| 41 | L | A | 0.0000 | |
| 42 | P | A | 0.0000 | |
| 43 | A | A | -1.0274 | |
| 44 | V | A | -1.0171 | |
| 45 | D | A | -1.5623 | |
| 46 | F | A | -0.7030 | |
| 47 | S | A | -0.8922 | |
| 48 | L | A | -0.3720 | |
| 49 | G | A | -1.5676 | |
| 50 | E | A | -2.4261 | |
| 51 | W | A | 0.0000 | |
| 52 | K | A | -2.2363 | |
| 53 | T | A | -1.6762 | |
| 54 | Q | A | -1.7052 | |
| 55 | M | A | -0.9509 | |
| 56 | E | A | -2.5376 | |
| 57 | E | A | -2.7350 | |
| 58 | T | A | -1.7868 | |
| 59 | K | A | -1.9368 | |
| 60 | A | A | 0.0000 | |
| 61 | Q | A | -2.2449 | |
| 62 | D | A | -2.3055 | |
| 63 | I | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | T | A | -0.8962 | |
| 69 | L | A | -0.6270 | |
| 70 | L | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -1.4248 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | M | A | -0.6391 | |
| 76 | A | A | -0.5780 | |
| 77 | A | A | 0.0000 | |
| 78 | R | A | -1.4651 | |
| 79 | G | A | -1.0058 | |
| 80 | Q | A | -0.9523 | |
| 81 | L | A | -0.7925 | |
| 82 | G | A | -0.7991 | |
| 83 | P | A | -0.5253 | |
| 84 | T | A | -0.4390 | |
| 85 | C | A | -0.3958 | |
| 86 | L | A | 0.0000 | |
| 87 | S | A | 0.0000 | |
| 88 | S | A | -0.5647 | |
| 89 | L | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | G | A | -0.8254 | |
| 92 | Q | A | -1.0703 | |
| 93 | L | A | 0.0000 | |
| 94 | S | A | -1.1411 | |
| 95 | G | A | -1.0500 | |
| 96 | Q | A | -0.9289 | |
| 97 | V | A | 0.0000 | |
| 98 | R | A | -1.5078 | |
| 99 | L | A | 0.1077 | |
| 100 | L | A | 0.0000 | |
| 101 | L | A | -0.5539 | |
| 102 | G | A | -0.6397 | |
| 103 | A | A | -0.2943 | |
| 104 | L | A | 0.0000 | |
| 105 | Q | A | -0.8171 | |
| 106 | S | A | -0.5297 | |
| 107 | L | A | 0.0000 | |
| 108 | L | A | -0.5141 | |
| 109 | G | A | -0.6711 | |
| 110 | T | A | -0.8335 | |
| 111 | Q | A | -1.2704 | |
| 112 | L | A | -0.8634 | |
| 113 | P | A | -0.8240 | |
| 114 | P | A | -1.5594 | |
| 115 | Q | A | -2.1400 | |
| 116 | G | A | -2.2421 | |
| 117 | R | A | -2.2107 | |
| 118 | T | A | -0.6896 | |
| 119 | T | A | -0.0051 | |
| 120 | A | A | 0.1020 | |
| 121 | H | A | -0.8736 | |
| 122 | K | A | -1.8208 | |
| 123 | D | A | -2.0854 | |
| 124 | P | A | 0.0000 | |
| 125 | N | A | -0.8975 | |
| 126 | A | A | -0.5828 | |
| 127 | I | A | 0.0000 | |
| 128 | F | A | 0.0000 | |
| 129 | L | A | 0.1647 | |
| 130 | S | A | 0.0000 | |
| 131 | F | A | 0.0000 | |
| 132 | Q | A | 0.0000 | |
| 133 | H | A | -1.2605 | |
| 134 | L | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | R | A | -1.5987 | |
| 137 | G | A | -1.0150 | |
| 138 | K | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | R | A | -0.3675 | |
| 141 | F | A | 0.8643 | |
| 142 | L | A | 0.0000 | |
| 143 | M | A | 1.2584 | |
| 144 | L | A | 2.4043 | |
| 145 | V | A | 2.1117 | |
| 146 | G | A | 0.6348 | |
| 147 | G | A | 0.0000 | |
| 148 | S | A | 0.7898 | |
| 149 | T | A | 0.0400 | |
| 150 | L | A | 0.0095 | |
| 151 | C | A | 0.2152 | |
| 152 | V | A | 0.7090 | |
| 153 | R | A | -1.3011 | |
| 154 | R | A | -0.9744 | |
| 155 | A | A | -0.4598 | |
| 156 | P | A | -0.6821 | |
| 157 | P | A | -0.5798 | |
| 158 | T | A | -0.0004 | |
| 159 | T | A | 0.3360 | |
| 160 | A | A | 0.7277 | |
| 161 | V | A | 1.3308 | |
| 162 | P | A | 0.0530 | |
| 163 | S | A | -0.7976 | |
| 164 | R | A | -1.6904 | |
| 165 | T | A | -0.5753 | |
| 166 | S | A | 0.7068 | |
| 167 | L | A | 2.5759 | |
| 168 | V | A | 3.3975 | |
| 169 | L | A | 3.0044 | |
| 170 | T | A | 1.6776 | |
| 171 | L | A | 1.1945 | |
| 172 | N | A | -0.9278 | |
| 173 | E | A | -1.3182 | |
| 174 | L | A | 0.4992 |