| Chain sequence(s) |
H: QVQLKESGPGLVAPSQSLSITCTVSGFSLTNYGVTWVRQPPGKGLEWLGVMWGDGSINYHSALISRVSVSKDNSKSQVFLKLNSLQTDDTATYYCAKHYYGSSYGYYAMDYWGQGTSVTVSS
L: DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWHQQKPGQSPKALIYSASFRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYISYPFTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:44)
[INFO] Main: Simulation completed successfully. (00:03:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4199 | |
| 2 | V | H | -0.9128 | |
| 3 | Q | H | -1.6051 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -1.8976 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.8263 | |
| 8 | G | H | -0.4423 | |
| 9 | P | H | -0.1461 | |
| 11 | G | H | 0.2343 | |
| 12 | L | H | 1.1346 | |
| 13 | V | H | 0.0000 | |
| 14 | A | H | -0.4907 | |
| 15 | P | H | -1.2095 | |
| 16 | S | H | -1.3727 | |
| 17 | Q | H | -1.7476 | |
| 18 | S | H | -1.4304 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.6341 | |
| 21 | I | H | 0.0000 | |
| 22 | T | H | -0.4044 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.9912 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.9888 | |
| 27 | G | H | -0.9274 | |
| 28 | F | H | -0.4772 | |
| 29 | S | H | -0.6690 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -1.4167 | |
| 36 | N | H | -1.4577 | |
| 37 | Y | H | -0.5138 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | T | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.9801 | |
| 45 | P | H | -1.3745 | |
| 46 | P | H | -1.3122 | |
| 47 | G | H | -1.4807 | |
| 48 | K | H | -2.2782 | |
| 49 | G | H | -1.4471 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8190 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | M | H | 0.2171 | |
| 57 | W | H | -0.4917 | |
| 58 | G | H | -1.3467 | |
| 59 | D | H | -1.9330 | |
| 63 | G | H | -0.8792 | |
| 64 | S | H | -0.1936 | |
| 65 | I | H | 0.7822 | |
| 66 | N | H | 0.4464 | |
| 67 | Y | H | 0.6228 | |
| 68 | H | H | 0.2207 | |
| 69 | S | H | 0.4594 | |
| 70 | A | H | 0.5516 | |
| 71 | L | H | 0.0000 | |
| 72 | I | H | 1.7629 | |
| 74 | S | H | 0.4919 | |
| 75 | R | H | -0.2565 | |
| 76 | V | H | 0.0000 | |
| 77 | S | H | -0.3280 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.2920 | |
| 80 | K | H | -1.0278 | |
| 81 | D | H | -1.7080 | |
| 82 | N | H | -2.0521 | |
| 83 | S | H | -1.7540 | |
| 84 | K | H | -2.4111 | |
| 85 | S | H | -1.6572 | |
| 86 | Q | H | -1.3663 | |
| 87 | V | H | 0.0000 | |
| 88 | F | H | 0.1338 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.0025 | |
| 91 | L | H | 0.0000 | |
| 92 | N | H | -1.5081 | |
| 93 | S | H | -1.3354 | |
| 94 | L | H | 0.0000 | |
| 95 | Q | H | -2.1854 | |
| 96 | T | H | -1.6195 | |
| 97 | D | H | -2.2498 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8446 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.4138 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | H | H | 0.3309 | |
| 108 | Y | H | 0.6416 | |
| 109 | Y | H | 0.4271 | |
| 110 | G | H | 0.0381 | |
| 111 | S | H | -0.1100 | |
| 111A | S | H | 0.2661 | |
| 112B | Y | H | 1.0837 | |
| 112A | G | H | 0.5002 | |
| 112 | Y | H | 0.8824 | |
| 113 | Y | H | 0.6787 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.0330 | |
| 117 | Y | H | -0.3701 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -2.0470 | |
| 121 | G | H | -1.2942 | |
| 122 | T | H | -0.7749 | |
| 123 | S | H | -0.3721 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0943 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.1090 | |
| 128 | S | H | -0.2037 | |
| 1 | D | L | -1.2880 | |
| 2 | I | L | 0.1429 | |
| 3 | V | L | 1.0301 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5583 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8958 | |
| 8 | Q | L | -0.8113 | |
| 9 | K | L | -1.3159 | |
| 10 | F | L | 0.4104 | |
| 11 | M | L | -0.0048 | |
| 12 | S | L | -0.5392 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | -1.1926 | |
| 15 | V | L | -0.3760 | |
| 16 | G | L | -1.6651 | |
| 17 | D | L | -2.9369 | |
| 18 | R | L | -3.0652 | |
| 19 | V | L | -1.4602 | |
| 20 | S | L | -0.4308 | |
| 21 | V | L | 0.0000 | |
| 22 | T | L | -0.7545 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.0429 | |
| 25 | A | L | -1.1005 | |
| 26 | S | L | -0.8832 | |
| 27 | Q | L | -1.3402 | |
| 28 | N | L | -1.9508 | |
| 29 | V | L | 0.0000 | |
| 36 | G | L | -0.8102 | |
| 37 | T | L | -0.5044 | |
| 38 | N | L | -0.0268 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | H | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5416 | |
| 46 | P | L | -1.1227 | |
| 47 | G | L | -1.4682 | |
| 48 | Q | L | -2.1495 | |
| 49 | S | L | -1.5712 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4641 | |
| 52 | A | L | -0.6003 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7679 | |
| 56 | S | L | 0.4417 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.5014 | |
| 66 | F | L | 1.5152 | |
| 67 | R | L | -0.2402 | |
| 68 | Y | L | 0.1468 | |
| 69 | S | L | -0.2952 | |
| 70 | G | L | -0.7895 | |
| 71 | V | L | -0.9003 | |
| 72 | P | L | -1.2623 | |
| 74 | D | L | -2.3118 | |
| 75 | R | L | -1.8442 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.4723 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.2503 | |
| 80 | G | L | -1.0225 | |
| 83 | S | L | -0.9680 | |
| 84 | G | L | -1.3800 | |
| 85 | T | L | -1.8716 | |
| 86 | D | L | -2.1666 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6621 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6101 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.2681 | |
| 93 | N | L | -2.7531 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -1.4828 | |
| 96 | S | L | -1.0910 | |
| 97 | E | L | -1.7317 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.7113 | |
| 100 | A | L | 0.0000 | |
| 101 | E | L | -1.2049 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | I | L | 0.6553 | |
| 109 | S | L | 0.6877 | |
| 114 | Y | L | 0.7468 | |
| 115 | P | L | 0.3258 | |
| 116 | F | L | 0.0000 | |
| 117 | T | L | 0.2974 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1980 | |
| 121 | G | L | -1.1439 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.9969 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2384 | |
| 126 | I | L | -0.9598 | |
| 127 | K | L | -1.5852 |