Project name: query_structure

Status: done

Started: 2026-03-16 23:43:49
Settings
Chain sequence(s) A: GTCNTPGCTCDPWPICTRDGLPTCGETCFG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:09)
Show buried residues

Minimal score value
-2.4165
Maximal score value
1.4346
Average score
-0.5624
Total score value
-16.8707

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.2402
2 T A -0.1763
3 C A -0.5222
4 N A -1.2366
5 T A -1.1392
6 P A -0.9278
7 G A -1.2977
8 C A -1.3963
9 T A -1.3793
10 C A -0.7169
11 D A -2.0759
12 P A -1.0180
13 W A 0.0145
14 P A 0.0854
15 I A 0.3423
16 C A 0.0000
17 T A 0.0000
18 R A -2.0523
19 D A -2.4165
20 G A -1.1771
21 L A 0.3603
22 P A -0.1232
23 T A -0.4051
24 C A -0.5959
25 G A -0.6168
26 E A -0.5728
27 T A 0.2113
28 C A 0.4415
29 F A 1.4346
30 G A 0.3255
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Laboratory of Theory of Biopolymers 2018