Project name: query_structure

Status: done

Started: 2026-03-17 01:28:54
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAYYWGYGRSYVYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.5069
Maximal score value
1.9855
Average score
-0.3037
Total score value
-28.552

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6799
2 S A 0.6578
3 S A 0.5732
4 V A 0.3648
5 P A 0.0000
6 T A -1.4277
7 K A -2.5025
8 L A 0.0000
9 E A -1.7076
10 V A 0.1565
11 V A 1.5402
12 A A 0.8867
13 A A 0.2989
14 T A -0.6002
15 P A -1.1590
16 T A -1.0149
17 S A -0.5574
18 L A 0.0000
19 L A 0.7130
20 I A 0.0000
21 S A -0.6499
22 W A 0.0000
23 D A -2.1134
24 A A -1.0103
25 S A -0.5982
26 S A -0.4497
27 S A -0.3706
28 S A -0.0362
29 V A 0.5056
30 S A 0.4252
31 Y A 0.5257
32 Y A 0.0000
33 R A -0.2918
34 I A 0.0000
35 T A -0.5475
36 Y A -0.2329
37 G A 0.0000
38 E A -1.4321
39 T A -1.1876
40 G A -1.2083
41 G A -1.3103
42 N A -1.5044
43 S A -0.7996
44 P A -0.2803
45 V A 0.4975
46 Q A -0.7636
47 E A -1.6021
48 F A -0.6381
49 T A -0.2178
50 V A 0.0469
51 P A -0.2012
52 G A -0.1569
53 S A -0.3258
54 S A -0.3366
55 S A -0.4996
56 T A -0.1844
57 A A 0.0000
58 T A 0.3027
59 I A 0.0000
60 S A -0.6687
61 G A -1.0410
62 L A 0.0000
63 K A -2.3571
64 P A -1.6632
65 G A -1.4325
66 V A -1.4028
67 D A -2.0552
68 Y A 0.0000
69 T A -0.6908
70 I A 0.0000
71 T A -0.1511
72 V A 0.0000
73 Y A 0.6060
74 A A 0.0000
75 Y A 1.0930
76 Y A 1.2364
77 W A 1.1937
78 G A 0.5054
79 Y A 0.7795
80 G A -0.4597
81 R A -1.0875
82 S A 0.2893
83 Y A 1.1927
84 V A 1.9855
85 Y A 1.2739
86 S A 0.4733
87 P A 0.3496
88 I A 0.1183
89 S A -0.4647
90 I A -0.5816
91 N A -1.4563
92 Y A -1.3751
93 R A -2.5069
94 T A -1.5105
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Laboratory of Theory of Biopolymers 2018